Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0723 ATGGAAATACTTCCTTGTTCCGGTGTTCAATATGCTGGAGAATCTGATTGCCCTCAACGCGGTTCTGGAACAGCTTTTGTCTATCAGGAAGAACCTAATTGCCCTGAAAATGTCGAACAAGCTAAATTGGTCGACGGTCAACTGAATGGATCATTGCATAACATGCAAGAGTTAGAGATAGAAAGGAGAGATGACGGGACACAGAATGTTGCTGATTTGTTGACTAATTCGAATTGTCAATGCAATGGAGCTTCATGTTGTAACTGTCAAGGGGAAGACCAAAAGGGTTACGGTGGTTTCCATGATTTTGATGAAGACATGATAAATGAACGTTACTTAACCTCTGAGAATTCTCTCTCCGTGGTTGATACAATTGACAGTGAATCACCAAATAACGGTAGGGAAGGAGACTTGTCTTTTTCAGAACCCAAGTGGCTAGAGGGGGATGCATCTGTTGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCTAGCTGGTATCCGATGTGCAAGGGCTGACTGGCCATTATCAACTTTGAGAGCAAAACCAACTCATGACCGAAAGAAATATTTTGTCATATTTTTTCCGCACACAAAGATTTATTCTTGGGCAGATATGCTGCTTGTTAGGTCAATTGATGAGTATCCGCATCCTGTTGCATACAAGACTCATCAAGTAGGACTGAAATTGGTAAAGGACTTAACAGCTGCACGGCGGTTTATAATGCAAAAGCTAGTTGTTGGCATGCTGAACATCGTTGATCAGTTTCATCTTAATGCTTTGACAGAAACTGCCCGTGATGTGAAAGTCTGGAAGGCATTTGCCATGGAGGCTTCTCGTTGTAATGGTTATTCTGATTTTGGAAGAATGCTTCTAAGGATACACAATAGCATCCTGGCGCACTACATAAGTGCCAACTGGTTACAGCATTCTTCTCACTCTTGGATTGAGCGATGTCAGAGTACAAATAGTGCTGAATCGGTAGAACTTCTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGATGTCAACAATCTCTGGGACTCACCAGTTCAACCAATATTAGGTTCTGAATGGAAAACCTGGAAGCATGATATAATGAAATGGTTCACGCCATCACCTCCCTTATCTAGCAGCAAAGACACTCCTCGGCAGATTTCTCTTGATCCATACCAAACAAACCTTCAGGTATCTAGAAAAAGGCCTAAACTTGAAGTTCGCCGTGCAGATACACATGCTTCAAAAGTGGAATTCAAGGGTGCAGATCATGCTATTGCTCTTGTGAATGACCCTGGTTTCTTTAAGAATCAGGAGACATTGAGCACATTAGAAGCTGAGGCTTGTAAGCTTGAAAATATTGGAAAGGTATCTATCACAAATGATCTGTCCGGTAATTTGACCGATAAATGGAATGATATTGTAGTTGAGGCTGCTGATTCTGGTTTCATGCATACCAGAGAAAATGAATTAACACCTATAAATGAAATGGCTGGTGTAATATCTGCGGAGCCCGGTAGTAAGAATCGACAATGTATAGCTTTTATTGAAGCCAAGGGAAGACAGTGTGTAAGATGGGCAAATGAAGGAGATGTATATTGTTGTGTGCATTTATCTTCTCGTTTTTTGGCTAGCTCAGGAAATGCCGAAAATCCGGGTCAAATTGATACTCCAATGTGTGATGGTACAACTGTTGTGGGTACTAAATGTAAGCATCGGGCGCTACCTGGATCTTTACACTGTAAGAAGCACCGGCCTTATACTGAAACAGATCAGATCTCATGTTTACCCCAAAATACTATAAAGAGGAAGCATGGAGAAAATTATACTGGTTCAGAGAACATGTTCAGCAAAGACATGGTTTTGGTAAATGTTGAAGCTCCACTGCAAGTGGTTCCAGTGCCATCCATTGCTGGTGATTCATTACATGGAGAAAGCAACTTGTTTGGGAAGCCAATGCATTCTGAAGAGGGTCATGTTGCAACGGAGGCTCTGAACTGTATAGGTTCTCCTCCATTTGATAATAAGAATCCTTGTAGGGAAGCTCCTAAACGCTATTCCTTGTACTGCGAGATCCACCTTCCAAGTTGGCTTAAGCGAGCAAGAAATGGGAAGAGTAGAATAGTATCAAAAGAAGTGTACTCAGAACTTTTGAAGGGCTGCAGCTCGTGGGAGCAGAAGGTACAACTGCATGAAGCATGTGAGCTTTTTTATAGGCTATTCAAAAGCATTTTATCACTAAGAAACCAAGTTCCTAAGGATGTCCAATTCCAATGGGCTTTGACTGAAGCCTCTAAAGTTACTGGTGTTGGAGAATTTTTTACAAAGTTGATTCTTAGTGAAAAAGAGAGAATCAAATTGATGTGGGGATTCAATGACGAAATGGATGTAACCCCTGTAATAGAAGAACAGCAACCTCTCTTGCTCATGCCACCCCCAATTAATCATAGTTTCGATAATGAAAATGCCATCAAGTGTAAGATATGCTCCACAGAATTTCCTGATGACCAAGCACTTGGTAACCATTGGATGGACAGTCATAAAAAGGAAGCTCAGTGGCTGTTTAGAGGCTATGCATGTGCCATTTGTCTGGATTCTTTTACCAACAAGAAACTACTGGAATCCCATGTTCAGGAGAGACATCATGTGCCATTTGTCGAACAGTGTATGCTTCTCCAATGCATTCCTTGTGGGAGTCATTTTGGAAGTTCTGAACAATTATGGCAGCATGTTTTATCAGCTCATCACGCTGATTTTAAGCCATCAAAAGCTCATGAGCAGCAAGCTTTCTCTACTGGGGAAGGTTCGGTGGTAAAGCATGACCAGGGAAATTCTGCCTCTATGGAAAATAATTCCAAGACTCCAGGTGGTCCACGGAGGTTAGCTTGCAGGTTTTGTGGGTTGAAATTTGATTTACTACCTGACCTAGGCAGACATCATCAAGCTGCTCATATGGGCCCCAATCTGGTTAGCAACCGTCCTGCTAAGAGGGGAGTTCGCTATTATGCATATAAACTAAAATCTGGCAGACTGAGCCGCCCTAAATTTAAAAAAGGTTTGGCAGCAGCCGCATCATTGAGAATGAGAAATAAAGCTAATGCCAATTTAAAGCGATGCATTCAGGCATCAAAGTCAATTGGCCTGGAAGAAACAACAACCGTGCAACCTCATGTAACAGAAACAACATATATTAGTGGATTGTCAGAAAATCAATGCTCAGCTGTTGCCAAAATTTTGTTTTCAGAAATTCAGAAAACTAAGCCTCGGCCTAACAATCTTGATATTTTATCAGTTGCTCGCCTTGCTTGCTGCAAAGTTAATCTTGTAGCCTCATTGGAAGAGAAATTTGGAGTTCTGTCTGAAAAGCTCTATTTAAAGGCAGCAAAACTTTGCAGCGAGCGTAATGTTGTTGTGAAATGGCACCATGAGGGGTTTGTTTGTCCAAAAGGTTGTAACTTGTTAAAGGATCAAGCCTTGCACTCTCCTTTAGCATCTCTTCCTAATGGTTTTGTAATACCGAAGTCTGTAAATTTTTCTGATCCTGCAAGTGATGAGTGGGAGGTCGACGAGTTTCACTGCATAATCAATTCTCAAAGTCTAGGTTCACGGAAAAAGGCCGTAGTATTGTGTGATGACATTAGCTTTGGAAAGGAATCAGTTCCTGTTATTTGTGTAGTAGATCAAGAACTTCTACATTCTCTAAATGCTGATGGATCTAATGAACCAGATATTATCTCTTCTAAACCTTGGGATAGCTTCTTCTATGTTACGAAGCCAATAATTGATCAATCCCTCGGTCTTGATTCAGAGAGTCCGCAATTGGGATGTGCCTGCTCATATTCATCCTGCTGTCCTGAAACATGTGGTCATGTATACCTTTTTGGTGATGACTATGCGGATGCAAAAGACAGATTTGGGAAGCCAATGCGTGGCAGGTTCCCATATGATCATAACGGTCGATTAATATTGGAGGAAGGTTACCTTGTCTACGAATGTAACCGTATGTGCAGATGCAATAAATCCTGTCCAAACAGAATATTGCAGAACGGAGTACGGGTCAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGGAGTAAGGGCTGGCGAAGCTATTCTGCGTGGAACATTTGTGTGTGAGTACATAGGAGAGGTTTTAGATGTGCAGGAGGCACACAACAGGCGCAAAAGATACGGCACAGGGAATTGCAGTTATTTCTATGACATCAATGCTCGTGTTAATGATATGAGCAGAATGATTGAAGAAAAGGCCCAATATGTGATTGATGCTTCTAAAAATGGAAATGTGTCGAGGTTCATCAATCATAGCTGCTCGCCCAATCTTGTCAGTCACCAAGTTCTCGTAGAGAGCATGGATTGTGAGCGTTCACACATTGGTTTTTATGCAAGTCAAGACATCGCTCTGGGTGAAGAACTGACATATGGATTTCAGTATGAGCTTGTGCCTGGGGAAGGATCTCCATGTTTGTGTGAATCATCAAAATGTAGGGGACGCCTTTACTAG 4524 0.4171 MEILPCSGVQYAGESDCPQRGSGTAFVYQEEPNCPENVEQAKLVDGQLNGSLHNMQELEIERRDDGTQNVADLLTNSNCQCNGASCCNCQGEDQKGYGGFHDFDEDMINERYLTSENSLSVVDTIDSESPNNGREGDLSFSEPKWLEGDASVALWVKWRGKWLAGIRCARADWPLSTLRAKPTHDRKKYFVIFFPHTKIYSWADMLLVRSIDEYPHPVAYKTHQVGLKLVKDLTAARRFIMQKLVVGMLNIVDQFHLNALTETARDVKVWKAFAMEASRCNGYSDFGRMLLRIHNSILAHYISANWLQHSSHSWIERCQSTNSAESVELLKEELFDSILWNDVNNLWDSPVQPILGSEWKTWKHDIMKWFTPSPPLSSSKDTPRQISLDPYQTNLQVSRKRPKLEVRRADTHASKVEFKGADHAIALVNDPGFFKNQETLSTLEAEACKLENIGKVSITNDLSGNLTDKWNDIVVEAADSGFMHTRENELTPINEMAGVISAEPGSKNRQCIAFIEAKGRQCVRWANEGDVYCCVHLSSRFLASSGNAENPGQIDTPMCDGTTVVGTKCKHRALPGSLHCKKHRPYTETDQISCLPQNTIKRKHGENYTGSENMFSKDMVLVNVEAPLQVVPVPSIAGDSLHGESNLFGKPMHSEEGHVATEALNCIGSPPFDNKNPCREAPKRYSLYCEIHLPSWLKRARNGKSRIVSKEVYSELLKGCSSWEQKVQLHEACELFYRLFKSILSLRNQVPKDVQFQWALTEASKVTGVGEFFTKLILSEKERIKLMWGFNDEMDVTPVIEEQQPLLLMPPPINHSFDNENAIKCKICSTEFPDDQALGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLESHVQERHHVPFVEQCMLLQCIPCGSHFGSSEQLWQHVLSAHHADFKPSKAHEQQAFSTGEGSVVKHDQGNSASMENNSKTPGGPRRLACRFCGLKFDLLPDLGRHHQAAHMGPNLVSNRPAKRGVRYYAYKLKSGRLSRPKFKKGLAAAASLRMRNKANANLKRCIQASKSIGLEETTTVQPHVTETTYISGLSENQCSAVAKILFSEIQKTKPRPNNLDILSVARLACCKVNLVASLEEKFGVLSEKLYLKAAKLCSERNVVVKWHHEGFVCPKGCNLLKDQALHSPLASLPNGFVIPKSVNFSDPASDEWEVDEFHCIINSQSLGSRKKAVVLCDDISFGKESVPVICVVDQELLHSLNADGSNEPDIISSKPWDSFFYVTKPIIDQSLGLDSESPQLGCACSYSSCCPETCGHVYLFGDDYADAKDRFGKPMRGRFPYDHNGRLILEEGYLVYECNRMCRCNKSCPNRILQNGVRVKLEVFKTEKKGWGVRAGEAILRGTFVCEYIGEVLDVQEAHNRRKRYGTGNCSYFYDINARVNDMSRMIEEKAQYVIDASKNGNVSRFINHSCSPNLVSHQVLVESMDCERSHIGFYASQDIALGEELTYGFQYELVPGEGSPCLCESSKCRGRLY* 1508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0723 1507 SMART set_7 1352 1490 IPR001214 GO:0005515
Mtr5g0723 1507 ProSiteProfiles Zinc finger C2H2 type domain profile. 960 988 IPR013087 -
Mtr5g0723 1507 ProSiteProfiles Pre-SET domain profile. 1273 1349 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr5g0723 1507 Gene3D SET domain 1191 1488 IPR046341 -
Mtr5g0723 1507 MobiDBLite consensus disorder prediction 924 953 - -
Mtr5g0723 1507 Pfam Zinc finger C2H2-type, 3 repeats 859 984 IPR040689 -
Mtr5g0723 1507 SMART preset_2 1209 1336 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr5g0723 1507 SUPERFAMILY SET domain 1202 1497 IPR046341 -
Mtr5g0723 1507 ProSiteProfiles Post-SET domain profile. 1491 1507 IPR003616 -
Mtr5g0723 1507 Pfam SET domain 1363 1481 IPR001214 GO:0005515
Mtr5g0723 1507 ProSitePatterns Zinc finger C2H2 type domain signature. 962 983 IPR013087 -
Mtr5g0723 1507 ProSitePatterns Zinc finger C2H2 type domain signature. 893 915 IPR013087 -
Mtr5g0723 1507 ProSiteProfiles Zinc finger C2H2 type domain profile. 891 920 IPR013087 -
Mtr5g0723 1507 ProSiteProfiles SET domain profile. 1352 1484 IPR001214 GO:0005515
Mtr5g0723 1507 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1507 - -
Mtr5g0723 1507 ProSiteProfiles Zinc finger C2H2 type domain profile. 857 880 IPR013087 -
Mtr5g0723 1507 MobiDBLite consensus disorder prediction 922 955 - -
Mtr5g0723 1507 SMART c2h2final6 891 914 IPR013087 -
Mtr5g0723 1507 SMART c2h2final6 960 983 IPR013087 -
Mtr5g0723 1507 SMART c2h2final6 823 846 IPR013087 -
Mtr5g0723 1507 SMART c2h2final6 857 880 IPR013087 -
Mtr5g0723 1507 Pfam Pre-SET motif 1212 1344 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr5g0723 1507 ProSitePatterns Zinc finger C2H2 type domain signature. 825 846 IPR013087 -
Mtr5g0723 1507 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1507 - -
Mtr5g0723 1507 Gene3D Classic Zinc Finger 818 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0723 Mtr-Chr5 7049015 7059750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0723 110 1506 C2H2 Transcription Factor Family AT2G23740 50.566 0.0 1343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr5g0723 Pre-SET 2.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0723 - - gmx:100786757 2377.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0723 5 7049015 7059750 Mtr5g0723 5 7049015 7059750 ECH