Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0710 ATGTTTCTTCATCTTCATCACATGATAAAAAATTTCATCATGATCATAACAATCTTCTTATTGAGCAAAACAAGAGCACAGAACAACAGCAATAACACAACTTGTTTGAATCGTTGTGGAGATGAAACTCTTCAATATCCTTTTGGAATCTCTGAAGGTTGTGGAATCAAACTAAACTGTACCAACAACAAAGTCCAAATTGACGATTTTCTGATTCAAAACTTAACAAAAAACAGTATATTCATCTACCTTCCTGCAAAATGCAACCGTAGTATTGCATCTATTCGACCACTTTTCAATGATAATTTTGCTCCAACAAGAAACAATAGTTTTCTAGTTCAAGATTGTTCAGCTTCTTTAGGTGGATGTGTGATTCCAGCTTCAAGTTTTGGTGGAAATCAGATTGAAGTTGAAAGCTGTGATAGCAAAAGTAGTAATATTAGTTGTTTTACTCAAGAGTATCATGAAGGAGATGTTGATGTTTTGAGTTATGATGAATTGAATAAGACTAAGTGTAACTATTTGTTCTCAGCTATTGCTGTTGAACAGAACAAAGAAATTTCTTTGCAGTTTCAAGCTATTGAATTAGGTTGGTGGCTTCAAGGTTCTTGTGAATGTTCTAACAATGCTACTTGTTCAACGGTAAATTTGCAAGGAAATGGTACTGGATTTCGTTGTCAATGTGTTGATGGTTTCCGAGGAGATGGATTTGCTAGCGGCACTGGTTGCCGGAAAGCTCCAAGTTGCAGTGCTTCAACAATAACATCCGGGGGATGTGGGAGTGCAACTAAAATCGGCGTTGTTGTCGGAGCGGTTGTAGCCGGAGTTGTGATTGTGGCTGCTCTCATTCTTATATGGTACTGTGCCAGGCGCCGTTTTACTTGGTTGAGAAAACATACCAGAGTAAAGCGCCTACTACGTGAAGCTGCTGGAAACTCTATTGTGCCTCTCTACGCTTACAAAGACATAGAAAAAGCTACAAATTCTTTCTCTGATAAACATATGCTGGGAACCGGGGCTTTCGGTACAGTCTATGCTGGAAAACTTCACAATGATGAGTTTGTTGCAATAAAGAAGATAAGGCATAGAGACACCAATAGTGTAGATCAAGTCATGAATGAGATCAAGCTCCTTTCTTCGGTCAGTCACCCGAATTTGGTTCGCCTCCTAGGTTGCTGCATTGAGGAGGGAGAACAGATACTTGTTTATGAATATATGCCACATGGAACGCTTTCTCAACATTTGCAGAGAGAGAGGGGTAAAGGTCTTCCGTGGACAATACGACTCACCATTGCTTCTGAAACTGCTAATGCTATAGCTTATCTCCATTCTGCAATTCATCCTCCAATTTACCACAGAGACATAAAATCCAGCAATATACTCTTGGATTATAACTACAAATCTAAAGTAGCTGATTTTGGGCTTTCTAGGCTTGGCTTGATGGAGACATCACATATTTCAACTGCACCACAAGGGACTCCAGGTTATGTGGATCCTCAATACCACCAGAATTTCCATCTTTCTGATAAAAGTGATGTATACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCATGAAAGTGGTTGATTTTGGCAGACCTCAGAGTGAGATTAATTTAGCTGCACTTGCTGTTGATAGGATTCGGAGAGGTTCTGTAGATGAGATTGTAGATCCCTTCCTTGAACCAAATAGAGATGCTTGGACTCTATATTCCATTCATAAGGTGGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACACGAGGCCTACTATGATGGAAGTGGCTGAGGAGCTGGAGTACATCAGACGCCGTGCATGGGCAACTATGGAGGAAGCCATATGCTTGGGTTCATCAGTTGGATCCGGAAGTTCATCGCCTCGCTATGGAAGTGAGAACTCAGTGAGTGGTATTAAGTTGAAGACAGTAGGTCAAGAGAGTGAGGGATTGATTGTTCCACCCAAAAATGATAACATATTGAAGTCTATGGAAATGGAGGTGATGGACAGCTCCCCTGTATCGGTGCATAATCCTTGGTCGAGTGGACCGAGCTCACCTTCAACGAACAGCTTGTTGGGAAACGTCGTTCGGTGA 2103 0.4089 MFLHLHHMIKNFIMIITIFLLSKTRAQNNSNNTTCLNRCGDETLQYPFGISEGCGIKLNCTNNKVQIDDFLIQNLTKNSIFIYLPAKCNRSIASIRPLFNDNFAPTRNNSFLVQDCSASLGGCVIPASSFGGNQIEVESCDSKSSNISCFTQEYHEGDVDVLSYDELNKTKCNYLFSAIAVEQNKEISLQFQAIELGWWLQGSCECSNNATCSTVNLQGNGTGFRCQCVDGFRGDGFASGTGCRKAPSCSASTITSGGCGSATKIGVVVGAVVAGVVIVAALILIWYCARRRFTWLRKHTRVKRLLREAAGNSIVPLYAYKDIEKATNSFSDKHMLGTGAFGTVYAGKLHNDEFVAIKKIRHRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEEGEQILVYEYMPHGTLSQHLQRERGKGLPWTIRLTIASETANAIAYLHSAIHPPIYHRDIKSSNILLDYNYKSKVADFGLSRLGLMETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPQSEINLAALAVDRIRRGSVDEIVDPFLEPNRDAWTLYSIHKVAELAFRCLAFHSDTRPTMMEVAEELEYIRRRAWATMEEAICLGSSVGSGSSSPRYGSENSVSGIKLKTVGQESEGLIVPPKNDNILKSMEMEVMDSSPVSVHNPWSSGPSSPSTNSLLGNVVR* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0710 700 MobiDBLite consensus disorder prediction 676 700 - -
Mtr5g0710 700 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 672 IPR045274 GO:0007166
Mtr5g0710 700 MobiDBLite consensus disorder prediction 674 700 - -
Mtr5g0710 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Mtr5g0710 700 Gene3D Transferase(Phosphotransferase) domain 1 406 618 - -
Mtr5g0710 700 SMART serkin_6 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0710 700 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Mtr5g0710 700 Gene3D Phosphorylase Kinase; domain 1 293 405 - -
Mtr5g0710 700 SUPERFAMILY Protein kinase-like (PK-like) 312 604 IPR011009 -
Mtr5g0710 700 Pfam Protein kinase domain 331 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0710 700 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 19 672 - -
Mtr5g0710 700 ProSiteProfiles Protein kinase domain profile. 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0710 Mtr-Chr5 6939192 6944162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0710 1 700 Receptor kinase-like Gene Family AT2G23450 55.696 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr5g0710 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0710 - - gmx:100779130 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0710 5 6939192 6944162 Mtr8g2565 8 36115971 36120608 PCT