Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0705 ATGACCATGGTCATGGATGAATTCCTATTCAAAACTCTCATTGCAAGCATTCTCTCCCTGTTAATTGGAATCTTGATATATCACTTAAAGAAAACACATGGTCATCGCCACAAAACTGCACCTCAAGCAGGAGGTGCATGGCCTATTATTGGCCATTTGCACCTCTTTGGAAGTAAGCAACTTACACACAAAACACTTGGTATGATGGCTGACAAACATGGACCAATTTTCACAATCAAACTTGGTTCATACAAAGTTCTTGTACTAAGTAGCAGTGAAATGGCCAAAGAATGTTTTACTCTCCACGACAAAACATTTTCCACTAGACCCTTAGTTGCAGCCTCAAAATTAATGGGTTACAACTATGCTATGTTTGGTTTCACTCCTTATGGTCCTTATTGGCGTGAGATAAGGAAATTAGCTACACTTGAGCTTCTTTCGAATCACCGACTCGAACTGTTGAAGGACACAAGAGTATCTGAGATAGAAGCTGCAGTAAGTGAGCTTTATAGGTTATGGTCGATAAAGGGTTGTCCAAAAGAAGGTGTTTTGGTTGATATGAAGCAGTGGTTTGGTGATTTGACACAAAATATTGCTCTGAGAATGGTGGGAGGGAAGACATACTATGGTGCTGGTGAAGGTGAAGCTAGGAGGTATAAGGAAGCTATGAGAGATTGGGTGTGTTTGTTTGGTATGTTTGTGGTCTCTGATGCAATTCCATTTTTGGGTTGGTTAGATATTGATGGTCATGAGAAGGCCATGAAGAAAACTGCTAAGAAACTGGACACTCTGGTTGAAGGATGGCTGGAGGAACACAAAAAGAAAAGAGCTTTAGGTAACAGTCGAAAGGAAGAACAGGATTTCATGGATGTCATGTTGAATGTTCTGCAGGATTCAGAGATTTGTGGTTATGATTCAGATACAATCATCAAGGCTACTTGCCTGAATCTGATTTTAGCAGGAAGTGACACCACCATGGTGACCCTAACATGGGCACTATCCCTCCTACTCAATCATCAAATGGAACTTAATAAAGTACAGGATGAGTTAAACACTCATATTGGGAAGGACAGGAAGGTGGACGAATCTGACATAAAGAACTTGGTCTACCTCCAAGCCGTTGTCAAGGAAACATTGCGCCTATATCCACCAAGTCCAATAATCACCTTGCATGCAGCGATGAATGACTGCACTTTTTCATGTGGTTATCACATTCCTGCTGGTACACAGTTGATAGTGAATGTATGGAAGATCCACCGTGATGCTCGTGTTTGGACTGATCCTCATGATTTTAAGCCCGGGAGGTTCTTGACAAGTCACAGAGATGTCGATGTCAGAAGTCCGAACTATGAGCTCGTCCCTTTTGGTTCTGGAAGGAGAGTATGCCCTGGGGCTTCATTGGCTCTGAGAGTGGTGCAATTGACATTGGCTAGATTGCTACACTCTTTCAATGTTGTTTCCCCTTCAAATCAATCTGTAGACATGACAGGAAGCCCTGGACTCACTAATTTAAAAGCAACCCCGCTTGAAGTTGTCCTTACTCCACGTCTAGATACCAACCTCTACGAGAACTAG 1575 0.4229 MTMVMDEFLFKTLIASILSLLIGILIYHLKKTHGHRHKTAPQAGGAWPIIGHLHLFGSKQLTHKTLGMMADKHGPIFTIKLGSYKVLVLSSSEMAKECFTLHDKTFSTRPLVAASKLMGYNYAMFGFTPYGPYWREIRKLATLELLSNHRLELLKDTRVSEIEAAVSELYRLWSIKGCPKEGVLVDMKQWFGDLTQNIALRMVGGKTYYGAGEGEARRYKEAMRDWVCLFGMFVVSDAIPFLGWLDIDGHEKAMKKTAKKLDTLVEGWLEEHKKKRALGNSRKEEQDFMDVMLNVLQDSEICGYDSDTIIKATCLNLILAGSDTTMVTLTWALSLLLNHQMELNKVQDELNTHIGKDRKVDESDIKNLVYLQAVVKETLRLYPPSPIITLHAAMNDCTFSCGYHIPAGTQLIVNVWKIHRDARVWTDPHDFKPGRFLTSHRDVDVRSPNYELVPFGSGRRVCPGASLALRVVQLTLARLLHSFNVVSPSNQSVDMTGSPGLTNLKATPLEVVLTPRLDTNLYEN* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0705 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PANTHER CYTOCHROME P450 82C3-RELATED 5 522 - -
Mtr5g0705 524 Pfam Cytochrome P450 41 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Mtr5g0705 524 Gene3D Cytochrome P450 34 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PANTHER CYTOCHROME P450 CYP82D47-LIKE 5 522 - -
Mtr5g0705 524 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0705 524 SUPERFAMILY Cytochrome P450 46 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0705 Mtr-Chr5 6906103 6912024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0705 12 522 Cytochrome P450 AT4G31940 50.383 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0705 - - gmx:606549 839.336