Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0702 ATGGCGTTTAATTTCTCAACTCCTCAACAATCTCAACCGCAACAAACTCTGTTTCAACCACAACAACAACAACAACAATCTCCTTTTCAACAACAGAGTAGTTTATTCCAGCCACAACAACCACAATTTCAACCACAACAACAATTTCAACAGCAACAATTTCAAGCACAGCAACAACAACAGCAACAGTTGTTTTTGTTCACGAACGATAAAACACCTGCGAGTTACAGCACCAATTGGGCAGATCTACATCCTGATTCGCAGAAATTTCTACTTCAGATTGAAGAACGGGTATTGGAATATAGAGATGAAAGTCAAAGACTTGATCAGTGTAATCGTCTTTATGATTCGTCTGTTTCCAACGATGGATTTGAGGTTGATGCTAGCCACATTGTTCAGGAACTTGGTGGAATCAGCACTGCTATGGAACGGCAGAAAACTTTGCTACAGGAATTAACGTCGGCTGTTAAAGATATGTTACGTAATACAGAGGTTGCTGTTCGATCCTTTATGATCCTACGTCCAAGGTTCCATTATCCTAGTGGGGGAGCATCAAGTGCCACTGCCCCATCACAGACTCCTGGAGCAACAACACCTAGTTTGAACAGCCAACCACCAGCTACATCTATGGTGCCCGTTTTTGATTTCTACAGTGGTCTTCCGAAGAAACCATCACCCTTTTTACAGCAAACAATTCTTAGATTTGAGAAATATATTGGTGAATGTCATCAGTGGATTCAAGAGTTAGAGCAGCTGCTTCTCCTAGAATCTGAAAAAAATGCTTCCAGTAATGGATCCTCGTTATTGCAATCTCTTCCCAAAGTCATGACAAATGTACATGACTTTTTTGTTCACGTGGCTGCAAAGGTGGAGAGCATTCACCAGTACATGGAATCCATGAAAACAGCATACCTAGCTGATCAGCGCCGTCGAGGGGAGGTGAATGATCCATTTCTAGAGGCTGATCGGCGAGAAACTGCAAGACAAGAAGCAGCATCAAAAAGAGTTCACCCTACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAGGAGCATTGGTTTCCCAACAGACCGCTGCAACAACTCCGTCTTTGTCAATAGGAAGTGGTTCATCTCTTTTTAACACACCGTCTTCAGCCCCATCAACTACGCCATCTTTGTTTGGAACACCAACAACTCCTGCTCAAGGAGCCTCATGGCCTGCACCATCTAGTTCTACGCCTCAAGGCTCACTTTTTGGTTCTGCCTCATCATCCTTACCTGGTGCAACATCAACTCCCTCTCTGTTCGGTAATAGTACGCCATTGTTTAACTCAACTCCGGCTGGAACTTCAGTCTTTCCATCTCCCTATGTTTCAGGTGCTGCGACAGGATCAGGAGCAAGCTTTGGGGCTAAAAATCCACGGTCGAAATCTAGAACTGCTCGGCGCTAA 1470 0.4395 MAFNFSTPQQSQPQQTLFQPQQQQQQSPFQQQSSLFQPQQPQFQPQQQFQQQQFQAQQQQQQQLFLFTNDKTPASYSTNWADLHPDSQKFLLQIEERVLEYRDESQRLDQCNRLYDSSVSNDGFEVDASHIVQELGGISTAMERQKTLLQELTSAVKDMLRNTEVAVRSFMILRPRFHYPSGGASSATAPSQTPGATTPSLNSQPPATSMVPVFDFYSGLPKKPSPFLQQTILRFEKYIGECHQWIQELEQLLLLESEKNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYMESMKTAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALVSQQTAATTPSLSIGSGSSLFNTPSSAPSTTPSLFGTPTTPAQGASWPAPSSSTPQGSLFGSASSSLPGATSTPSLFGNSTPLFNSTPAGTSVFPSPYVSGAATGSGASFGAKNPRSKSRTARR* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0702 489 MobiDBLite consensus disorder prediction 316 335 - -
Mtr5g0702 489 Gene3D - 223 313 - -
Mtr5g0702 489 MobiDBLite consensus disorder prediction 1 52 - -
Mtr5g0702 489 MobiDBLite consensus disorder prediction 183 205 - -
Mtr5g0702 489 MobiDBLite consensus disorder prediction 316 356 - -
Mtr5g0702 489 Coils Coil 142 162 - -
Mtr5g0702 489 MobiDBLite consensus disorder prediction 184 205 - -
Mtr5g0702 489 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 452 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Mtr5g0702 489 MobiDBLite consensus disorder prediction 340 356 - -
Mtr5g0702 489 MobiDBLite consensus disorder prediction 384 489 - -
Mtr5g0702 489 MobiDBLite consensus disorder prediction 384 468 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0702 64 489 NAC Transcription Factor Family AT4G37130 62.014 3.09e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0702 K14307 - gmx:100776992 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0702 5 6858561 6864642 Mtr5g0702 5 6858561 6864642 ECH