Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0701 ATGCCTACTCTGCGAAAGCGAAGTCGCAGAGAAATTGTTGAGAATCCTCCTCAATCTGAAATTGAAATCCCGATGAAAGATCACAAAAACAAAAAGTCTGAATACGAGCTCTCAAGAGAAGAAAGAATCCGAGAAAATCGTGAAAGAATGGGAAAATTGGGTCTTTTCGACATTTCGCTCTCCCTCAAACCTAATCCACCTTCACGTCCAACCGCATCCAAGAAGCCCAAATCCCCTGTTTCTCTCAAACCATCTCGTCGATCTACAAGATTGCAGAATGTTGCTCCGATTCGTTACACTGAAGAAGCAATTAACAAGAGAATTTACTGGAAAAAGAAGGTGAAGAAAACTCCTTCCAAATTAATGCCAGACAGCTACACGTGGTTGAAATACGATCGTAAACAGATCAAGGGCTCAATAAGAGATTATTCCGAGTGTAGCACGGTGAATTGCCCAGCGAAGAAATACGAGGATCGTGCACGAGATGATCCAACGGTGGTCATCGTAACGTACAATGGGGAGCACACACACCCATAG 537 0.4339 MPTLRKRSRREIVENPPQSEIEIPMKDHKNKKSEYELSREERIRENRERMGKLGLFDISLSLKPNPPSRPTASKKPKSPVSLKPSRRSTRLQNVAPIRYTEEAINKRIYWKKKVKKTPSKLMPDSYTWLKYDRKQIKGSIRDYSECSTVNCPAKKYEDRARDDPTVVIVTYNGEHTHP* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0701 178 MobiDBLite consensus disorder prediction 1 89 - -
Mtr5g0701 178 MobiDBLite consensus disorder prediction 1 52 - -
Mtr5g0701 178 SUPERFAMILY WRKY DNA-binding domain 119 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g0701 178 Gene3D WRKY domain 108 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g0701 178 PANTHER ZINC-FINGER DOMAIN OF MONOAMINE-OXIDASE A REPRESSOR R1 15 114 - -
Mtr5g0701 178 Pfam WRKY DNA -binding domain 124 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g0701 178 SMART WRKY_cls 122 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g0701 178 PANTHER OS05G0300700 PROTEIN 15 114 IPR040221 GO:0006355
Mtr5g0701 178 ProSiteProfiles WRKY domain profile. 117 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0701 Mtr-Chr5 6856842 6858272 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0701 123 177 WRKY Transcription Factor Family AT2G24570 56.897 3.06e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr5g0701 WRKY 1.3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0701 - K13425 mtr:MTR_5g018380 345.51