Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0685 ATGAATCCTCCTCCGGCCATGGATATGCCGATCATGCACGACAGCGACCGTTACGATTTCGTTCGAGATATTGGATCAGGGAATTTCGGCGTTGCTAGACTCATGAGAGATAAACACACCAAAGAGCTTGTTGCTGTCAAATATATCGAACGCGGAGATAAGATTGATGAAAATGTTAAGAGAGAAATAATCAATCATAGGTCTTTGAGACATCCTAATATTGTCAGGTTTAAGGAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAAATGTTTGACAGAATCAGCAGAGCAGGACGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAGCTGATATCCGGTGTCAGCTATTGTCATTCAATGCAAGTATGTCATCGGGATCTGAAGTTGGAAAACACTTTGTTGGATGGAGATCCAGCACTTCATTTGAAGATCTGTGATTTTGGATACTCCAAGTCTTCGGTTCTTCATTCACAACCAAAGTCAACTGTGGGAACTCCGGCTTATATTGCCCCAGAAGTACTGCTGAAGCAAGAGTATGATGGAAAGGTTGCAGATGTATGGTCATGTGGAGTAACCTTATACGTGATGCTTGTGGGATCATATCCTTTTGAAGATCCCGATAATCCAAAGGACTTCCGGAAGACAATTCAGAGGGTTCTCAGTGTCCAGTATTCCGTTCCAGACTTTGTTCAAATATCTCCTGAATGTCGTGAAGTTATATCAAGAATCTTTGTTTTTGACCCTGCAGAGAGAATCACCATTCCAGAAATATTGAAAAATGAATGGTTTCTGAAGAATCTTCCTGCTGACTTGGTGAATGAAAAGTTAACGGATAACCAATTTGAAGAGCCAGATCAGCCCATGCAGAGCATGGATACGATCATGCAGATCATTTCAGAAGCTACCGTACCAGCAGCTGGGAGCTATTTAGACCAGTTTATGCCTGATAATGATACGGATGATGATATGGATGATATGGACTCTGACTATGAACTTGATGTAGATAGTAGTGGGGAGATTGTATATGCCATATAA 1068 0.4148 MNPPPAMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKHTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEMFDRISRAGRFTEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGDPALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKVADVWSCGVTLYVMLVGSYPFEDPDNPKDFRKTIQRVLSVQYSVPDFVQISPECREVISRIFVFDPAERITIPEILKNEWFLKNLPADLVNEKLTDNQFEEPDQPMQSMDTIMQIISEATVPAAGSYLDQFMPDNDTDDDMDDMDSDYELDVDSSGEIVYAI* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0685 355 Pfam Protein kinase domain 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0685 355 Gene3D Transferase(Phosphotransferase) domain 1 94 281 - -
Mtr5g0685 355 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Mtr5g0685 355 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 10 349 - -
Mtr5g0685 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Mtr5g0685 355 Gene3D Phosphorylase Kinase; domain 1 2 93 - -
Mtr5g0685 355 SUPERFAMILY Protein kinase-like (PK-like) 16 310 IPR011009 -
Mtr5g0685 355 PANTHER SERINE/THREONINE KINASE 10 349 - -
Mtr5g0685 355 ProSiteProfiles Protein kinase domain profile. 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0685 355 SMART serkin_6 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0685 Mtr-Chr5 6715997 6720750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0685 11 284 CBL-interacting serine-threonine protein kinases AT4G24400 42.756 5.11e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mtr5g0685 Pkinase 4.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0685 K14498 - gmx:100783967 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2597 8 36510669 36515629 Mtr5g0685 5 6715997 6720750 PCT