Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0679 ATGCGTTGGTTGCCAACCCTAATTTTCAATCCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCGCTACATCTCCTTCAACGCGAAAATCATCATCAGCTTCTTCTTCTTCTCCTTCATCTGCTTCTTCAGAACCTTCTGATTCAAGGAGGAGCTCGCGCGGCACGTGGTTTTTCGGCAACGGTAAAAAATCAACGCGATCAAGGAAGCTACGACACGTGGATGATGCTAACGTTGAATACTCAACCGCACCGATTCAACGGTCTCCGAGTGCACGGGGTTATATTCGGTCTAATACTTCTTCCTCCGTTGCACCTCAGCCGTTGCCGTTGCCGGAGTCACCTGGTGGGTTGTTAAGGCAAAGAGATGCTGATTGTCGGTTGCCGTCGCCATTGCCGAAAGAAGCTTCTGGACCATCCCTGTCGCCGAGAGAAGCTTCTGGTAGAGTCACGGAATCTGATGTTAATGTTGGTGTTGGTTCTCTTCCCGTTGGATTTAAAATGCGCAGTGTTTTTGCAAGCAAAGAGACGAGAAGGAATGCAGAGAATGCGGAGACAAGGCCACCTGGGAGTAGGAGTGTGCGTCAAGATACAAGTGGGGATGCAGCTCCAGGCTTTCGAGGGAATAACTTCCGGATAAGTGTCCCTCCAAGGAGTACTAGTACTTCAAATACTCCCTTTACCAGTCCCACAATCAGCCCATATGACACCAAACAAGATGATTTTGTGCCATATTATTATGTGTCACCAAAAGCAAATCAATTCTGGTCTGCACCAGAAATGCCAACATCTACGGGGCAACCACCTCCTGCTTTCTTTGATTTATCTGCGTCAGGCATTGATGGTGCCTCTTCTCCCCATCAAAGTCCTGGAGGAAAAAACCCCAAAAGCCCAGCTAGATCTTCTTCACCCCTACCAAGGTTATCCCTTGACTACCCAACAGCTGCACGCCGTGAAAGGTTATCTCTTGAATACCCAACAACTGCACCTCCTCCCAGTGTTCACCCGTTACCCTTGCCTCCTTGGCCTGGAACTTCCTTACCTTCACCCTCTGCCAATGCTACCTATTCTCAACCTGGAGTGGCTAAGACAGAGTCCTTATCTATGAAAAGTCAATGGCAAAAGGGTAAACTTATAGGGCGAGGTACTTTTGGAAGTGTTTATGTTGCCACTAATAGAGAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGACATATTTTTTGATGATCCAAAATCTGCCGAGAGTATAAAGCAGTTAGAACAGGAAATTAAAGTTCTCAGCCATCTACAACATCCAAATATTGTGCAGTATTACGGTAGTGAAATAATAGAAGACAAGTTTTATATTTATTTGGAATTTATCCATCCTGGTTCAATAAATAAATACGTTCGGGACCACTGTGGTGCGATAACAGAATCCGTTGTTCGGAATTTCACACGACATATTCTTTCGGGGTTGGCTTACTTGCACAGCAAAAAGACAATTCACAGGGATATCAAAGGGGCTAACTTGCTTGTTGATTCTTCTGGTGTTGTTAAGCTTGCTGATTTTGGGATGGCCAAGCATCTAACTGGGCATTCTGCTGATCTGTCTTTGAAAGGAAGTCCATATTGGATGGCTCCAGAGCTTATGCAAGCGGTCATACATAAAGATAACAGCTCTGATCTAGCTTTTGCAATTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTCACGGGAAAGCCTCCTTGGAGTGAATATGAAGGAGCTGCAGCTATGTTTAAGGTAATGAAGGATACCCCTCCTATACCTGAAACATTGTCAACAGAAGGTAAAGATTTCTTGAGGCTTTGCTTTGTAAGAAATCCAGCAGAGCGGCCAACTGCTTCAATGTTATTAGAGCATCGGTTTCTGAAAAACGTACAACATTCAGATCCTTCACCTTCCTCCCATCTATATAATGGAACAACCTTGATGGATAAACCCCATAGCCCCAGAGGGTTATCAGAAAACAAACCTGATCAGTTTTCCATTGTCAGTGCACAGATTGGAAAAGGGAAATCTGCCACCGAGAGTGGCATTGGGATGTCCCACTCGCTCTACTCTTGA 2094 0.4484 MRWLPTLIFNPSSSSSSSSSSATSPSTRKSSSASSSSPSSASSEPSDSRRSSRGTWFFGNGKKSTRSRKLRHVDDANVEYSTAPIQRSPSARGYIRSNTSSSVAPQPLPLPESPGGLLRQRDADCRLPSPLPKEASGPSLSPREASGRVTESDVNVGVGSLPVGFKMRSVFASKETRRNAENAETRPPGSRSVRQDTSGDAAPGFRGNNFRISVPPRSTSTSNTPFTSPTISPYDTKQDDFVPYYYVSPKANQFWSAPEMPTSTGQPPPAFFDLSASGIDGASSPHQSPGGKNPKSPARSSSPLPRLSLDYPTAARRERLSLEYPTTAPPPSVHPLPLPPWPGTSLPSPSANATYSQPGVAKTESLSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEADIFFDDPKSAESIKQLEQEIKVLSHLQHPNIVQYYGSEIIEDKFYIYLEFIHPGSINKYVRDHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGHSADLSLKGSPYWMAPELMQAVIHKDNSSDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSTEGKDFLRLCFVRNPAERPTASMLLEHRFLKNVQHSDPSPSSHLYNGTTLMDKPHSPRGLSENKPDQFSIVSAQIGKGKSATESGIGMSHSLYS* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0679 697 SMART serkin_6 372 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0679 697 MobiDBLite consensus disorder prediction 328 346 - -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 638 667 - -
Mtr5g0679 697 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 681 - -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 638 652 - -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 257 308 - -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 347 366 - -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 212 234 - -
Mtr5g0679 697 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 681 - -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 7 62 - -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 1 234 - -
Mtr5g0679 697 SUPERFAMILY Protein kinase-like (PK-like) 366 660 IPR011009 -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 280 307 - -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 678 697 - -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 323 366 - -
Mtr5g0679 697 MobiDBLite consensus disorder prediction 81 106 - -
Mtr5g0679 697 ProSiteProfiles Protein kinase domain profile. 372 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0679 697 Pfam Protein kinase domain 373 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0679 697 Gene3D Transferase(Phosphotransferase) domain 1 368 658 - -
Mtr5g0679 697 ProSitePatterns Protein kinases ATP-binding region signature. 378 401 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0679 Mtr-Chr5 6630286 6635654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0679 1 670 MAP Kinase Kinase Kinase AT5G66850 51.275 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr5g0679 Pkinase 5.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0679 - - cam:101502514 1016.53