Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0675 ATGGGTCTATGCACTTCAAAAAATCTCACTCATTCCTCTCGCAATTTCAACACTGAACTTCCTCAACAAAACTCCGTCACACTTAACGGAAGTTCTGAACCTCACACAAACTCCGTCACTGTCAATGGCGAAAACTCTAACGAAACAGAAACCGTTAAGCGATCTCCGTTATTCCCGTTCTACACTCCAAGTCCAGCTCATCAATTCTTCTCTAAGATGTCTCCGGCGAGGAATTTTTTCAAGCGGCCGTTTCCTCCGCCGTCTCCGGCGAAGCATATAAGATCGCTTCTAGCTCGACGGCGTGGCTCCGTTGAAGTGTCGATACCGGAAGGTGGTGAAGAGGAGACTGTGGTTGCTCTTGATAAGAATTTTGGATTTTCCAAGCATTTTGGAAGTAGATATGAGGTTGGAGATGAGGTTGGAAGAGGACATTTTGGATATACTTGTGCTGCGAGGTTGAAGAAAGGTGATCGCAAAGGTCAACAAGTTGCTGTTAAAGTCATTCCCAAAGCTAAGATGACATCTGCTATTGCTATTGAGGATGTGAGAAGGGAAGTGAAAATATTGAGAGCTTTGAATGGACATAAGAATCTAGTACGATTCTATGATGCTTATGAAGATCGTGATAATGTCTATATTGTAATGGAATTGTGTGAAGGTGGAGAGCTGTTGGACAGAATATTATCAAGAGGTGGAAAGTACACGGAGGAAGATGCAAAAGCTATCCTGAGACAAATACTGAATGCTGCTGCATTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTTGCATCCAAGGACGAGAACTCAGAATTGAAGGCTATAGACTTTGGGCTGTCGGATTTTGTTAAACTAGATGAAAGGCTCAATGATATTGTTGGTAGTGCATACTATGTGGCTCCTGAAGTTCTACTTAGAGCTTATAGTACTGAGGCTGATGTCTGGAGTATTGGAGTGATTGCGTATATTTTATTATGTGGCAGCCGTCCGTTTTGGGCTCGGACTGAGTCTGGTATCTTTCGCACTGTATTGAAATCTGATCCAAGTTTTGACGATCCTCCTTGGCCATCTCTATCAGATGAGGCAAGCGATTTTGTTAAGAGATTACTAAATAAAGATCCAAGGAAAAGAATGAGTGCAGCACAAGCATTAAGTCATCCGTGGATTAAAAACTATGATGATACGGAAGTACCTTTGGATATTTTAATTTTCAAGCTCATGAAGGCATACATGCGCTCTTCTTCTCTACGAAAAGCTGCTTTAAGGGCTTTGTCTAAGGCATTAACTGTGGATGAGCTAATCTATTTGAAGGAGCAGTTTGCACTTTTAGAACCTAACAAAAGTGGCACCATTAACTTGGAAAATATAAAAGCGGCCTTTTCAGTAAATGCAACAGATGCAATGAAGGAGTCACGCATTGCCGACTTTCTGGCATCACTTAATGCATTGCAATATAGAAGGATGGATTTTGACGAGTTCTGTGCAGCTGCCCTTAGTGTTCATCAAGTTGTAGCACTCGACCACTGGGAGAAGCGTGCACGTTATGCCTTTGACCTGTTTGAAAAGGATGGAAACAAGGCCATAGTCATTGACGAATTAGCTTCGGAGCTTGGGCTTGGTCCATCCATTCCTGTTCATGCTGTTCTTCATGATTGGATTCGGCACACTGATGGGAAGTTAAGCTTCCTTGGATTTGTGAAATTGTTGCATGGCCCATCAAGAAGTGTTGCAAAAGTTCAATAG 1764 0.424 MGLCTSKNLTHSSRNFNTELPQQNSVTLNGSSEPHTNSVTVNGENSNETETVKRSPLFPFYTPSPAHQFFSKMSPARNFFKRPFPPPSPAKHIRSLLARRRGSVEVSIPEGGEEETVVALDKNFGFSKHFGSRYEVGDEVGRGHFGYTCAARLKKGDRKGQQVAVKVIPKAKMTSAIAIEDVRREVKILRALNGHKNLVRFYDAYEDRDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAILRQILNAAAFCHLQGVVHRDLKPENFLFASKDENSELKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLLRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRTVLKSDPSFDDPPWPSLSDEASDFVKRLLNKDPRKRMSAAQALSHPWIKNYDDTEVPLDILIFKLMKAYMRSSSLRKAALRALSKALTVDELIYLKEQFALLEPNKSGTINLENIKAAFSVNATDAMKESRIADFLASLNALQYRRMDFDEFCAAALSVHQVVALDHWEKRARYAFDLFEKDGNKAIVIDELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSVAKVQ* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0675 587 Pfam Protein kinase domain 134 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0675 587 SMART serkin_6 134 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0675 587 Gene3D Phosphorylase Kinase; domain 1 127 223 - -
Mtr5g0675 587 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
Mtr5g0675 587 Gene3D Transferase(Phosphotransferase) domain 1 224 419 - -
Mtr5g0675 587 Gene3D - 420 578 - -
Mtr5g0675 587 CDD STKc_CAMK 133 395 - -
Mtr5g0675 587 ProSiteProfiles Protein kinase domain profile. 134 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0675 587 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Mtr5g0675 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Mtr5g0675 587 MobiDBLite consensus disorder prediction 1 51 - -
Mtr5g0675 587 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 40 582 - -
Mtr5g0675 587 SUPERFAMILY Protein kinase-like (PK-like) 131 421 IPR011009 -
Mtr5g0675 587 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 582 - -
Mtr5g0675 587 SUPERFAMILY EF-hand 424 578 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0675 Mtr-Chr5 6597357 6602332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0675 1 587 EF-hand Containing Proteins AT3G50530 70.487 0.0 891
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr5g0675 Pkinase 9.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0675 K00924 - gmx:100794177 914.45