Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0658 ATGGCCACCGATTCACCAGAACTCACTCTTTCCCTTCCCACAAAGAAACCTCAACCCATCCCATGGACCCACCAAGAAACCATTAACCTCATTCGAGCTTATCAAGATAAATGGTACTCTCTCAAAAGGGGTCCACTCCGCGGCAGTCAATGGGAAGAAGTGGCTGTAGTCGTAGCCGCTCGTTGCGGCTACGATTACAACCACCCTTCCAAAACCGCTCTTCAATGTCGTCATAAGATGGAAAAGCTCCGTCAACGTCACCGATCTGAAAAACGCCGCCTCACCGCTACTTCCTCTGTCGCCTCTTCTCGATCCTGGCAGTATTTTCGTCTCATGGATGATCTTGAACGTGGTCCTTTACCTATCTCCGTCAGACCTCTTTCTCACAACCACCCTATCTCCGACGATAGTGACGGCGCTGCTGCTAGGTCAAGGAGTATTCATAATATTCTTAACCAGAAACAACGTGATGAAACTGATGAGGAAGAGGAAGATGTGATGGCGAAGGGTTTGACAGCGGAGTTAAGAAGTTTTGCAGAGAGGATTATAGGGTTGGAAAATATGAAGATGGAGATGATGAAGGAAACAGAGAGATTTAGATTGGAGATGGAGAATAAGAGGATTCGTATGATACTTGAATCTCAATGGAGGATTGTTGATTCCATTGGAAAGGCATTTGGGTCTTCTTAG 690 0.4638 MATDSPELTLSLPTKKPQPIPWTHQETINLIRAYQDKWYSLKRGPLRGSQWEEVAVVVAARCGYDYNHPSKTALQCRHKMEKLRQRHRSEKRRLTATSSVASSRSWQYFRLMDDLERGPLPISVRPLSHNHPISDDSDGAAARSRSIHNILNQKQRDETDEEEEDVMAKGLTAELRSFAERIIGLENMKMEMMKETERFRLEMENKRIRMILESQWRIVDSIGKAFGSS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0658 229 Gene3D - 22 89 - -
Mtr5g0658 229 SMART 118neu2 29 120 IPR006578 -
Mtr5g0658 229 Pfam Myb/SANT-like DNA-binding domain 21 115 IPR044822 -
Mtr5g0658 229 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 163 IPR044823 -
Mtr5g0658 229 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 157 228 IPR044823 -
Mtr5g0658 229 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 13 163 - -
Mtr5g0658 229 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 157 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0658 Mtr-Chr5 6405120 6406275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0658 22 115 Trihelix Transcription Factor Family AT3G14180 31.579 3.86e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr5g0658 Myb_DNA-bind_4 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0658 - - mtr:MTR_5g017500 449.129