Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0638 ATGCACAACACCGACACAGCAACAATGAACGACCAACTCTCAAACCAAACCTCAATCTTCGGTCTCCGTCTCTACGTCATCCTCGGCATCATCGTTGGTGTCATCATCGTCCTCCTCCTCTTCTTCATCTCTATCTACCTTGCTTTCAAACACAACAACTCCAAAAAAACCAAAACAACTATCCCAAACATCTCCAAAGATGTTCCAGAAATCACTCTCGATGTTCCACCTCAACCCGACCCGTCTCCTCAACCCGACCCACCTTCCGAACAAAGTCACCCAGAAGAAGAAACTGCTCCTTTGAGTTACAAGAGAATTCAGTTTGAGATAGGAAAGAATCATAGAATATCTTACCCTGAACAACGTGGCTCTGTTGAACATAGTGGAGAACGAGAATCTCGACCGTTGGATCAAGTTAATGCTGTTATTCCTCAAGTTTCTCATCTGGGTTGGGGTCATTGGTATACTTTAAGAGAATTGGAAGATGCTACTAATGAATTTTCACCTGATAATGTTATTGGTGAAGGTGGTTATGGAATTGTTTATCATGGTATTTTGAAGGATAATACTAATATTGCTATTAAGAATTTGCTTAATAATAGGGGACAAGCTGAAAGAGAGTTTAAGGTTGAGGTGGAAGCTATAGGAAGAGTTCGTCATAAGAATTTAGTGAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGTTAGTGTATGAGTTTGTTGACAATGGTAACTTGGAGCAATGGTTACATGGTGATGTTGGACCTTGTAGTCCTTTAACTTGGGAAATTCGAATGAACATTATTCTTGGAACGGCGAAAGGGCTGACTTATCTTCATGAGGGGCTAGAACCAAAAGTTGTTCATCGCGACATTAAATCAAGCAACATTTTGCTTAGTAAGCAGTGGAATTCAAAAGTTTCTGACTTTGGTCTTGCCAAACTCCTTAGCCCTGAGAGCAGCTATATTACAACCCGGGTCATGGGTACATTTGGGTTTGTACATTCTCCTTTGTCTTTTATTTGTCCTATTAAAAACCTAGAAGAACTATGCATGAATTATGAGTTGAAAATAATTTGTACGTATTTGTTTTATTTCCGCAGATATGTAGCTCCTGAGTATGCAAGTACTGGAATGTTGAATGAAAGAAGTGATGTATATAGTTTTGGAATTCTTATTATGGAAGTGATTACTGGCAGGAATCCAGTTGAATATAGCCGTCCTGCAGAAGAGGTGAATTTAGTTGAGTGGCTCAAGAAGATGGTCAGTAACAGAAATCCAGAGGGAGTGTTGGATCCAAAGCTTCCAGAGAAACCTACTTCGAGGGCATTAAAGCGAGCTCTTCTTGTAGCCTTACGCTGCACTGACCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTAATACACATGCTTGAAGCTGAAGATTCACCTTACAAAGAGGAACGTCGAGTTAGAAGGGATCCAGGCGTAGGAAGTTCACCTACCACCAGTATAGAGGATAGATCGAAAGAGGAGGCCGCTGTATCAATTGATGATGGTATGCTTGAAAACGAGAAGTGTACTAATGAGACAAGTTCAAATCATGAAGTAGAGAAGCAATAA 1611 0.4072 MHNTDTATMNDQLSNQTSIFGLRLYVILGIIVGVIIVLLLFFISIYLAFKHNNSKKTKTTIPNISKDVPEITLDVPPQPDPSPQPDPPSEQSHPEEETAPLSYKRIQFEIGKNHRISYPEQRGSVEHSGERESRPLDQVNAVIPQVSHLGWGHWYTLRELEDATNEFSPDNVIGEGGYGIVYHGILKDNTNIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEFVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKQWNSKVSDFGLAKLLSPESSYITTRVMGTFGFVHSPLSFICPIKNLEELCMNYELKIICTYLFYFRRYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVEYSRPAEEVNLVEWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEERRVRRDPGVGSSPTTSIEDRSKEEAAVSIDDGMLENEKCTNETSSNHEVEKQ* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0638 536 Pfam Protein kinase domain 170 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0638 536 MobiDBLite consensus disorder prediction 476 491 - -
Mtr5g0638 536 SMART serkin_6 167 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0638 536 Gene3D Transferase(Phosphotransferase) domain 1 243 490 - -
Mtr5g0638 536 MobiDBLite consensus disorder prediction 476 536 - -
Mtr5g0638 536 ProSitePatterns Protein kinases ATP-binding region signature. 173 195 IPR017441 GO:0005524
Mtr5g0638 536 ProSiteProfiles Protein kinase domain profile. 167 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0638 536 PANTHER RECEPTOR-LIKE KINASE PLANT 363 525 - -
Mtr5g0638 536 PANTHER RECEPTOR-LIKE KINASE PLANT 1 337 - -
Mtr5g0638 536 Pfam Protein tyrosine and serine/threonine kinase 370 473 IPR001245 GO:0004672|GO:0006468
Mtr5g0638 536 MobiDBLite consensus disorder prediction 57 100 - -
Mtr5g0638 536 MobiDBLite consensus disorder prediction 74 89 - -
Mtr5g0638 536 SUPERFAMILY Protein kinase-like (PK-like) 144 475 IPR011009 -
Mtr5g0638 536 PANTHER OS01G0323000 PROTEIN 1 337 - -
Mtr5g0638 536 PANTHER OS01G0323000 PROTEIN 363 525 - -
Mtr5g0638 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Mtr5g0638 536 CDD STKc_IRAK 173 475 - -
Mtr5g0638 536 MobiDBLite consensus disorder prediction 501 536 - -
Mtr5g0638 536 Coils Coil 187 207 - -
Mtr5g0638 536 Gene3D Phosphorylase Kinase; domain 1 138 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0638 Mtr-Chr5 6215696 6219231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0638 148 475 Receptor kinase-like Gene Family AT4G02010 40.541 2.88e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mtr5g0638 Pkinase 2.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0638 - - gmx:100797726 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0638 5 6215696 6219231 Mtr5g0638 5 6215696 6219231 ECH