Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0628 ATGGCGTCAAGCTCTCCGCCTCCGCCTTCCCCTTCTTCTTCTTCCAGATCCGACCCTCCGCTCGATCCTTCCACAAAGAAAGCGGAGGAAACAAGTCCTGCAGTTAAAGACGTGTTAGCGGTTATTGAATCTTTGAAGAAACAAGTTGCTGCAAAACGAATTGTTACGGTCAAGACTAGAGTGGAAGAAAATAGACAGAAACTGATTGCTACAACTAACCAGCTATGGAAATCGTCGGCGGAGAGGACATGCGGCATTGCCGATACAGATAGAGGTCTGGATTTGCTGAGTAAGAGGCAAAAAGAAGCAATTGATATGCATAATGGTATTCGTGCCGGTAATGATGATGGTGAGAGCAATGGTTATAATGGAGATGACCATGGTTCTACGGCAGTTCTTCTAGGATCTAATTATGCTGTAAAGAATGCTGTTCGGCCTATTAAATTACCTGAAGTAAAAAGATTGCCTCCTTACACTACGTGGATTTTTCTGGACAGAAATCAAAGAATGACAGAGGATCAATCAGTATTAGGTCGGAGGCGTATTTATTATGATCAAAATGGTGGTGAAGCACTTATTTGCAGCGACAGTGAGGAGGAACTAATTGACGAAGAAGAGGAAAAAAGAGAATTCGTAGAATCAGAAGATTTTATACTTCGCATGACTATCAGAGAATTTGGTTTATCTGATGTTGTTTTGGAGATCCTGGCTCAGTGCTTTTCTAGAAAAACTAGTGACATTAAGGTCAGATATGAAACTTTTTGCAATGAAGACAATAGTGGCGAGGATTCTAAAAATGGAGATGCACAAGATAATTCCCAAATTGACGATTCTTTTCTGGAAAAGGATCTTGAAGCGGCTCTTGACTCTTTTGACAACCTATTTTGTCGCCGATGTCGTGTTTTCGATTGCAGATTACATGGATGCTCTCAGGATCTTGTCTTCCCGGCTGAGAGGCAACCTTCGTGGACTCCTCCTAACACTGAAGATGTACCATGTGGGCCAAATTGTTTCCGAACGGTACTTAAGGCAGAAAAAATGGCCAAAGTCACATCTACTCAGACTGATGTTGAAGACAAATCCTCTGGTGGTGCTCTATCTAGGAAAAAATCTTCTGGTAGAAGGCGTATAAAATGCAGCCAAAGTGAAAGTGCTTCATCTAATGCTAGGAACATATCTGAGAGTAGTGACTCGGAGAATGGTCCTGGACGGGATGCTGCTTCAGGCTCCCACTCAGCCCCACCTAAAACTAAACCAGTGGGGAAAAGTGGAATCGGTAAGAGAAACAGTAAGCGAGTGGCAGAACGCGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAAACAGTAGCTTCTGATTCTGATTCCATTGTAAGTAGTATTCTTTGTTCAAGTGACATGCATTAGTCCAATTATTACCAAGATAATAAAGAAACAATTATTTTATTACACAAATGTGTCAAATTTCTTAATATTAAAAGATCCAAAAGGAATTTGGTTTGTGATAATCTGTACATAATGCAGAGTGAAGCTCCTGACCGCTCATTGAATGATATGGTTTCTGACCCACATGTTATGAGTGGGGAAGACAACACGAGGAAAGAAGAATTTGTGGATGAAAACATTTCAAAACAAGAATTGGCTGATAATAAATCTTGGAAAACTCTTGAAAAAGGGCTTTTAGAAAAAGGAATGGAGATTTTTGGCAAAAACAGCTGCCTAATAGCCAGGAATCTCTTAAATGGTCTAAAGACATGTTGGGATGTTTTCCAGTACATAAATTGTGAAGAAGGGAAGTTGTCTGGTTCTACTGGGGATGCTACAAATTCTCTCGTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGAAGAAGGTCAAAATTTTTACGTAGAAGAGGAAGAGTCCGTCGTTTAAAGTATACCTGGAAATCTGCTGCGTATCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGCCGACAGTACAATCCATGTGGATGCCAATCAGCTTGTGGAAAGGAGTGTCCTTGTCTTCTAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGTTGTAAAAATCGATTTCGAGGCTGTCATTGTGCGAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAACTGTTGGGTCAGCTGTGGTGATGGCACTCTTGGGATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAAGGTTCTTCTTGGACGGTCTGATGTGTCTGGCTGGGGAGCCTTCTTAAAGAATAGCGTTGGTAAGCATGAATACCTTGGAGAGTATACCGGAGAGTTGATTTCTCACCGGGAAGCAGATAAGCGAGGGAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTATCGAAAGGGTGATAAATTGAAGTTTGCAAACCACTCTCCTGTTCCAAATTGTTACGCGAAGGTTATTATGGTTGATGGAGATCATAGGGTAGGAATATTTGCTAAGGAACGAATTAATGCTGGTGAGGAGCTGTTTTATGATTACCGTTACGAGCCCGATAGAGCTCCTGCTTGGGCTCGAAAGCCAGATGCCCCTGGATTGAAAAAAGAAGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2742 0.4172 MASSSPPPPSPSSSSRSDPPLDPSTKKAEETSPAVKDVLAVIESLKKQVAAKRIVTVKTRVEENRQKLIATTNQLWKSSAERTCGIADTDRGLDLLSKRQKEAIDMHNGIRAGNDDGESNGYNGDDHGSTAVLLGSNYAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVLGRRRIYYDQNGGEALICSDSEEELIDEEEEKREFVESEDFILRMTIREFGLSDVVLEILAQCFSRKTSDIKVRYETFCNEDNSGEDSKNGDAQDNSQIDDSFLEKDLEAALDSFDNLFCRRCRVFDCRLHGCSQDLVFPAERQPSWTPPNTEDVPCGPNCFRTVLKAEKMAKVTSTQTDVEDKSSGGALSRKKSSGRRRIKCSQSESASSNARNISESSDSENGPGRDAASGSHSAPPKTKPVGKSGIGKRNSKRVAERVLVCMQKRQKKTVASDSDSIVSSILCSSDMH*SNYYQDNKETIILLHKCVKFLNIKRSKRNLVCDNLYIMQSEAPDRSLNDMVSDPHVMSGEDNTRKEEFVDENISKQELADNKSWKTLEKGLLEKGMEIFGKNSCLIARNLLNGLKTCWDVFQYINCEEGKLSGSTGDATNSLVEGYSKGNNEVRRRSKFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQKVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPVPNCYAKVIMVDGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPDAPGLKKEDGAPSSGRAKKLA* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0628 912 Gene3D SET domain 663 880 IPR046341 -
Mtr5g0628 912 CDD SET_EZH 763 879 - -
Mtr5g0628 912 MobiDBLite consensus disorder prediction 1 16 - -
Mtr5g0628 912 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 912 IPR025778 GO:0031519
Mtr5g0628 912 Coils Coil 195 215 - -
Mtr5g0628 912 SMART set_7 763 884 IPR001214 GO:0005515
Mtr5g0628 912 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 14 910 IPR045318 GO:0006338|GO:0018024
Mtr5g0628 912 Pfam SET domain 774 877 IPR001214 GO:0005515
Mtr5g0628 912 MobiDBLite consensus disorder prediction 378 405 - -
Mtr5g0628 912 MobiDBLite consensus disorder prediction 886 912 - -
Mtr5g0628 912 SUPERFAMILY SET domain 637 883 IPR046341 -
Mtr5g0628 912 ProSiteProfiles CXC domain profile. 649 748 IPR026489 -
Mtr5g0628 912 ProSiteProfiles SET domain profile. 763 878 IPR001214 GO:0005515
Mtr5g0628 912 MobiDBLite consensus disorder prediction 886 905 - -
Mtr5g0628 912 Pfam CXC domain 701 732 IPR041355 -
Mtr5g0628 912 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 14 910 - -
Mtr5g0628 912 SMART CXC_2 697 734 IPR033467 -
Mtr5g0628 912 MobiDBLite consensus disorder prediction 1 34 - -
Mtr5g0628 912 MobiDBLite consensus disorder prediction 350 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0628 Mtr-Chr5 6103751 6114820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0628 752 881 C2H2 Transcription Factor Family AT2G23740 27.891 4.75e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr5g0628 SET 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0628 - K11430 gmx:100809840 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0628 5 6103751 6114820 Mtr5g0628 5 6103751 6114820 ECH