Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr5g0623 | ATGGACGGTGGAAGAGGAAAAGGAGAGAGAAAGAGAAACGGTGGTGGTGTTGGTGTTGATGGAGAGAGAAGATACAAAGGAATTCGTATGAGAAAGTGGGGAAAATGGGTAGCTGAAATTCGAGAACCAAACAAACGTTCTCGAATTTGGTTAGGTTCCTATTCTACCCCTATCGCCGCCGCAAGAGCTTACGACACCGCCGTTTTCTACCTCCGGGGACCATCAGCTCGTCTCAATTTCCCAGAGCTACTCAACGGTGAAAACAACGCGGTTGTTGGTGGTGGTGATATGTCGGCGGCTACTATTCGAAAGAAAGCTACTGAAGTTGGTGCTAGAGTTGATGCTCTTCAAGCAGATGTTAATCATCATAGTCATAGCCATAGTCATAATCATAATCATCATCACCTTCAGCATAACCGGAACCAGCATCATCGTGTTATGCCGGTTCCGGAGTTGCTTGAAGGTGATGGTTCTGGTGATTTTGCTGAGAGAGTTGATTTGAATAAGATTCCTGAACCAGAGAGTTCTGATGAGTGGGATGTTAATTGA | 549 | 0.4554 | MDGGRGKGERKRNGGGVGVDGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPIAAARAYDTAVFYLRGPSARLNFPELLNGENNAVVGGGDMSAATIRKKATEVGARVDALQADVNHHSHSHSHNHNHHHLQHNRNQHHRVMPVPELLEGDGSGDFAERVDLNKIPEPESSDEWDVN* | 183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr5g0623 | 182 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
Mtr5g0623 | 182 | Pfam | AP2 domain | 24 | 73 | IPR001471 | GO:0003700|GO:0006355 | |
Mtr5g0623 | 182 | SMART | rav1_2 | 24 | 87 | IPR001471 | GO:0003700|GO:0006355 | |
Mtr5g0623 | 182 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 | 7 | 178 | - | - | |
Mtr5g0623 | 182 | CDD | AP2 | 24 | 83 | IPR001471 | GO:0003700|GO:0006355 | |
Mtr5g0623 | 182 | SUPERFAMILY | DNA-binding domain | 24 | 82 | IPR016177 | GO:0003677 | |
Mtr5g0623 | 182 | ProSiteProfiles | AP2/ERF domain profile. | 24 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Mtr5g0623 | 182 | MobiDBLite | consensus disorder prediction | 122 | 182 | - | - | |
Mtr5g0623 | 182 | Gene3D | AP2/ERF domain | 23 | 82 | IPR036955 | GO:0003700|GO:0006355 | |
Mtr5g0623 | 182 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED | 7 | 178 | - | - | |
Mtr5g0623 | 182 | MobiDBLite | consensus disorder prediction | 126 | 142 | - | - | |
Mtr5g0623 | 182 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Mtr5g0623 | 182 | PRINTS | Ethylene responsive element binding protein signature | 25 | 36 | IPR001471 | GO:0003700|GO:0006355 | |
Mtr5g0623 | 182 | PRINTS | Ethylene responsive element binding protein signature | 63 | 83 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr5g0623 | Mtr-Chr5 | 6034197 | 6035256 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr5g0623 | 14 | 178 | AP2-EREBP Transcription Factor Family | AT5G67190 | 60.440 | 3.47e-59 | 181 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Mtr5g0623 | AP2 | 4.8e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr5g0623 | K09286 | - | gmx:100783682 | 212.231 |