Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0618 ATGGCCGTTGAACTAATGATAGGACACAAAAACAACAATTTAACAAACAAATTCCAAGAGAATGCAGTTCAAGAAGCTGCTTCTGGTTTACAAAGCATAGAAAAACTCATTAAATTACTATCATCGTCACAAACATGTTCTTCAAATTCAAACCCTAATTCCATGGACTATAAAACCGTAGCTGATGTAGCAGTTTCAAAGTTTAAGAATGTTATTTCACTTCTGAATCAAAATAGAACAAGAACTGGTCATGCACGTTTCAGAAGAGCACCTTTACCTTCTACTACTGCCACTTCTGAAACTAGAGTCTACCATGCTACTCCGTTGCAGCAGATTCCTCCTCTAATCGCCAACAATATTGAAGTTATTGATAAGAATATCATTGATTTTTCTTATTCCTCTCAGGTTTCTTCTTCGTTTGGAAAGTCTTGTGTTTCTTCGTGCTCGTTGAAGAGAAAGTGTGGCTCTGATAATTTTGGCAATGGAAAGTGTGGTAGTTCATCTAGCCAATGTCATTGTTCAAAGAAGAGAAAAATGAGGTTGAAAAGAGTGGTGAGGGTAGCTGCAATAAGTTTGAAGATGGCTGATATTCCAACAGATGAATATTCTTGGAGGAAGTATGGTCAGAAACCTATTAAAGGATCACCTCATCCAAGGGGTTATTACAAGTGCAGCAGTATTAAAGGTTGTCCAGCACGAAAACATGTAGAAAGAGCTTTGGATGATCCATCTATGTTGGTAGTTACTTATGAAGGCGACCACAATCACTCCCTCTCTATGGTTGAAGCTAATAATCTCATCTTAGAATCCTCTTGA 816 0.3762 MAVELMIGHKNNNLTNKFQENAVQEAASGLQSIEKLIKLLSSSQTCSSNSNPNSMDYKTVADVAVSKFKNVISLLNQNRTRTGHARFRRAPLPSTTATSETRVYHATPLQQIPPLIANNIEVIDKNIIDFSYSSQVSSSFGKSCVSSCSLKRKCGSDNFGNGKCGSSSSQCHCSKKRKMRLKRVVRVAAISLKMADIPTDEYSWRKYGQKPIKGSPHPRGYYKCSSIKGCPARKHVERALDDPSMLVVTYEGDHNHSLSMVEANNLILESS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0618 271 SUPERFAMILY WRKY DNA-binding domain 195 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g0618 271 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 15 114 - -
Mtr5g0618 271 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 130 271 - -
Mtr5g0618 271 ProSiteProfiles WRKY domain profile. 193 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g0618 271 Pfam WRKY DNA -binding domain 200 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g0618 271 Pfam Plant zinc cluster domain 151 196 IPR018872 -
Mtr5g0618 271 SMART WRKY_cls 198 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g0618 271 Gene3D WRKY domain 183 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g0618 271 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 130 271 IPR044810 GO:0003700
Mtr5g0618 271 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 114 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0618 Mtr-Chr5 5986582 5988635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0618 1 90 WRKY Transcription Factor Family AT2G24570 42.857 8.77e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr5g0618 WRKY 2.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0618 - - mtr:MTR_5g016610 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0618 5 5986582 5988635 Mtr5g0618 5 5986582 5988635 ECH
Mtr5g0618 5 5986582 5988635 Mtr4g4682 4 60838874 60840438 PCT
Mtr4g3386 4 47203789 47205564 Mtr5g0618 5 5986582 5988635 PCT