Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0593 ATGGGAAAAAGTTGTCCTGCTAAGATTTGTATCAAGTTGAAAGAAGATGGATTGTGGTACATTAAAAAATTTGAGCCTAATCATTCTCATCATACCAGCCCTAGAAAGGCAAGGTTGTTAAAGGCTGACAAGAATATGGACTTGCATGTAAAGAGGACAATTCAAATCAATGATGATGCAGGTGTGAGGATCAACAAGAATTTTCAATCTCTTGTTAAAGATGCAGATGGGCATGAAAATGTACCATTTAATGAAAGAGATGTGAGAAATTATGTTAAAAAGGAACGGCATGCAATTGGAAAAGAAGGTGATGGCAAGGCCTTGATAAACTATTTTTGTCAAATGAGGGAACAAAATCCAAATTTCTTCTATGAAATAGATTTGGATGACGATTTTCATGTAAGGAATGTCTTTTGGGCTGATGCAAGAAGTGGGGCTGCTTATGAGTATTTTGGAGATGTTGTAACTTTCGACACAACATATTTGACCAACAAATATGATATGCCTTTTGCTATTTTTGTTGGTGTGAATCACCATGGTCAATCAATATTACTTGGATGTGGGTTGCTATCAGGAGAAGACAAAGAGTCGTTTGTATGA 600 0.36 MGKSCPAKICIKLKEDGLWYIKKFEPNHSHHTSPRKARLLKADKNMDLHVKRTIQINDDAGVRINKNFQSLVKDADGHENVPFNERDVRNYVKKERHAIGKEGDGKALINYFCQMREQNPNFFYEIDLDDDFHVRNVFWADARSGAAYEYFGDVVTFDTTYLTNKYDMPFAIFVGVNHHGQSILLGCGLLSGEDKESFV* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0593 199 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 4 199 - -
Mtr5g0593 199 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 199 IPR031052 GO:0006355
Mtr5g0593 199 Pfam MULE transposase domain 154 198 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0593 Mtr-Chr5 5749709 5752145 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr5g0593 MULE 2e-12 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0593 - - cam:101513893 275.018