Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0574 ATGAGAGTTGATGTATCCGTTAGTGTGATTGTTCGAGAATTCGAAGTTAATAAAGACAAAGAAAGAGTAGAAGCAGTTGAAAGGACATGTGAAGTTGGACCTAGTAACCAACTTTCTCTCTTCACCGACATGCTTGGTGACCCCATTTGCAGGGTCCGCCACTCACCTTCTTACCTCATGCTGGTGGCTGAAATTGATAAAGAAATAGTTGGAATGATAAGAGGATGCATAAAAACAGTCACATGCGGTAAAAACCTCTCAAGATCGAAAACATCTGTCACTAAACACATCCCAATTTACACCAAACTCGCTTACATTTTAGGCCTTCGTGTTTCTCCTAATCAACGTAGAATGGGAATAGGGTTGAAGCTAGTGAAAAAAATGGAGGCATGGTTTAAAGATAACGGCGCTGAATATTCATATATGGCAACGGAAACCGAAAATTTAGCGTCCGTTAAACTCTTCACTGAAAAATGCGGTTATACAAAGTTCCGTACACCGTCAATTCTCGTCAACCCCGTTTACGCTCACAGAACAAAAATTTCTAGAAAAGTCACCATCATTCCGTTAACTCCTTCTGACGCCGTTATTTTCTACCGTAACCGTTTCTCTACCACAGAGTTTTTCCCTAATGACATTGATGCTGTCGTTAATAACAAACTTAGTTTAGGTACTTTTCTTGCCGTACCAAGTGGGTCCTACAGTGTCAAAACATGGCCTGGCCCAGATAGGTTTCTCTTGGGCCCACCTTGTTCTTGGGCTATTTTAAGTGTTTGGAATTCTAAAGAGGTTTTTAAGCTCGAGGTACGTGGCGCGTCGCGCGTTAAACGTGGCCTTGCTAAAACGACACGTATTTTGGACCGGGCATTGCCGTGGTTGAAGGTGCCATCGGTTCCGGATTTGTTTCGGCCTTTTGGGTTTCATTTTTTGTATGGGCTTGGGGGTGAAGGCCCAAAGAAGTTGAAGATGGTTAAGGCTCTTTGTGAGTTTGCACATAATTTGGCTATGGAATGTGGGTGTGGGGTTGTGGCTACTGAGGTTGCTTCATGTGAACCATTAAGGTTTGGTATACCTCATTGGAAAATGCTATCTTGTGCCAATGATTTATGGTGTATTAAGAGGCTTGTTGATGATTATAGTGATGGTTCTATCGGTGATTGGACTAAGTCTATGCCAGGGATCTCCATTTTTGTGGATCCTAGAGAGATTTAA 1212 0.4241 MRVDVSVSVIVREFEVNKDKERVEAVERTCEVGPSNQLSLFTDMLGDPICRVRHSPSYLMLVAEIDKEIVGMIRGCIKTVTCGKNLSRSKTSVTKHIPIYTKLAYILGLRVSPNQRRMGIGLKLVKKMEAWFKDNGAEYSYMATETENLASVKLFTEKCGYTKFRTPSILVNPVYAHRTKISRKVTIIPLTPSDAVIFYRNRFSTTEFFPNDIDAVVNNKLSLGTFLAVPSGSYSVKTWPGPDRFLLGPPCSWAILSVWNSKEVFKLEVRGASRVKRGLAKTTRILDRALPWLKVPSVPDLFRPFGFHFLYGLGGEGPKKLKMVKALCEFAHNLAMECGCGVVATEVASCEPLRFGIPHWKMLSCANDLWCIKRLVDDYSDGSIGDWTKSMPGISIFVDPREI* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0574 403 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 50 165 IPR016181 -
Mtr5g0574 403 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 3 402 - -
Mtr5g0574 403 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 181 IPR000182 GO:0016407
Mtr5g0574 403 Gene3D - 7 168 - -
Mtr5g0574 403 CDD NAT_SF 60 139 - -
Mtr5g0574 403 Pfam Acetyltransferase (GNAT) family 53 161 IPR000182 GO:0016407
Mtr5g0574 403 PANTHER N-ACETYLTRANSFERASE 3 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0574 Mtr-Chr5 5550267 5552249 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mtr5g0574 Acetyltransf_1 6.1e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0574 - - gmx:100800613 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0574 5 5550267 5552249 Mtr5g0574 5 5550267 5552249 ECH
Mtr5g0574 5 5550267 5552249 Mtr4g3434 4 47848706 47850617 PCT