Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0570 ATGAAACCTCATAATTCAAGCTTCAACATCATCATTACCATCATCTTCATCTTCTTCTTCTCATCACTATCTGTTAACACTGCAAAACGTTTCAATGAATCCGATCATCATCACACAAGAAGAATTCTCCATCAACCATTATTCCCAGCGAGTTCAGCACCACCACCATCACCAACCACCGTTACACCACCACCACCACAACCTTCCTCCGACAACATTCCATTCTTCCATGAATATCCAGACGCACCACCGTCGAATCAGAATCAAGCAGCACCGTTAACTTCTAACGCCACAACAGCGAATCCAACGGCAACACAACCTGCAAAAGGAACAAAGAAAGTAGCAATAGCAATCTCCGTTGGAATCGTAACGTTAGGAATGTTGTCGGCGTTAGCTTTCTTTTTATACAAACACAGAGCAAAAAACGCCGCGGATACACAGAAGCTAGTGAGTACTACCACACAGAGGAACAATTCTCTTCAAGATTCATCGAATTCATCTGCTCCGGTAGTAGCTTCGAATTTTCTCTACATTGGAACTGTGGAACCTTCGAGAAGGTCAACGACGGTCAACGATCAGAATCAAACGGAGAAGCCTAACCGTTCACCGTATCATAAACTGAATTCCGTTAAGCGATCCGATCGGTATCGTCCGAGTCCGGAGTTACAGCCAATGCCGCCGTTGAGTAAACCTCCGAACGGAAACATTCCGCCGGCGATGTCGTCGGAAGAAGATTCCGATGAAGAAAGTAACGAAACAGCGTTCCATTCGCCGCAGAATTCTTCAGTAAGTCAGGAAGATGGATTTTACACGCCGTATTCAGTTTCACGGCAGAGTTCTCTCAGTAACGGTAGTCCGGCGAAGAAAGAGAGTAATTCGACGGTTACGCCGCTTCCTAAATCGAAGAGAACTTCACCGAAATCGAAATCTGCTCTTTCTGCTTCTTCTCCGGATATTCGACACGTCATCATTCCTTCTATCAAACAAACACCACTGCCGCAACGTCAGCAATCGGAGAAACAGTTAACCTCCTCCGGTGGAATAGGACATTCAAGAAAACCGAAATTCTCAGCACCACCACCACCGCCGAATTTGGTTCATCTTCAATCAACAACTAATACAGTTTCACACGTGTCTAAAACTTCACTTAACCATCCTCCGCCACCACCTCCACCTCCGCCACCTCCGCCACCGCTGATGACACGAAAATCAGTATCGCCGACACAGGCGGTGTCTGCATCTATAAGTAGATTAAGTGAAGGACCTGGTTCTGTTGGTAGTGTAACAAAAGGTTCAGAACCAGTTTCAGATCACGTTGATGAGAGTTTGAATTTGAGATCTTCTTCCGAGAGGCTTGTTGAAGAAGCTAATGAAACGGAAGGTGGAAAACCGAAGTTGAAAGCATTGCATTGGGACAAAGTTCGTGCAACTTCTGATCGTGCTACTGTGTGGGACCAAATAAAATCAAGCTCGTTTCAATTAAATGAAGATATGATGGAGTCTTTGTTTGGTTGCAACAATGGAACAAATTCTGCTCCAAAACCAAAAGAGCAAGGTGTTAGAAAATCAGTTCTTCCTTCTGTTGATCATGAGAACAAGGTGTTAGATCCTAAAAAGTCACAAAATATAGCTATACTGTTAAGGGCACTGAATGTGACAAGAGATGAAGTTTCTGAAGCTCTTTTGGATGGGAGTCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACCCTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAATTGAAAAACTATGACGGAGATCTCTCGAAACTTGGATCTGCTGAAAGATTTCTTAAAGCAGTGCTTGATATACCTTTTGCATTCAAAAGAGTTGAAGCTATGCTATATAGGGCCAACTTTGATTCTGAAATCAACTACCTCAAGAAGTCTTTCCAAACCCTTGAGGCAGCAAGTGAGGAATTAAGGAATAGCCGGTTATTCTTCAAACTCCTTGAAGCTGTTCTCAGAACAGGAAACAGAATGAATGTTGGCACTAATCGAGGTGACGCTAAAGCTTTCAAACTCGACACACTCCTGAAACTCGCAGATATAAAGGGAACAGATGGAAAGACCACATTACTGCACTTTGTGGTCCAAGAAATCATTAGGTCAGAAGGTGCAGAAACTGCATCTACAAACGGAAGTATACCCAACCAAATGGACTCCAAATTTAACGAGGAAGAGTTTAAGAAGAACGGATTGCATGTTGTGGCTGGTCTCAGTAAAGACCTTGGTAATGTCAAAAAAGCAGCAGGAATGGACTCAGATGTCTTAAGCAGCTACGTCACAAAGCTTGAAACGGGGCTTGAAAAAGTGCGATCAGTTTTGCAATATGAGAAGCCAGATATGAGAGGCAATTTCTTCAACTCCACAACGCTCTTTTTGAAATACGCAGAAGACGAAATTGTGAGGATTAAGTCTCATGAAAGAGAGGCTTTATTCCTTGTGAAAGAAGTTACTGAATACTTTCATGGGAATGCAGCAAAGGAAGAAGCACACCCTTTAAGAATTTTCATGATTGTGAGAGATTTTCTAAACATTTTGGATTTGGTTTGCAAAGAAGTGGGAAGGATGCATGATAGAATTGTTGGTGGTGCTTCAAGATCATTCAGAATAGCTTCAAATGCCCCATTACCTGTTCTTAACAGATACAATGGGAGACAAGATAGAAGCTCGGATGAGGAAAGCTCATCCCCTTAG 2727 0.4294 MKPHNSSFNIIITIIFIFFFSSLSVNTAKRFNESDHHHTRRILHQPLFPASSAPPPSPTTVTPPPPQPSSDNIPFFHEYPDAPPSNQNQAAPLTSNATTANPTATQPAKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKNAADTQKLVSTTTQRNNSLQDSSNSSAPVVASNFLYIGTVEPSRRSTTVNDQNQTEKPNRSPYHKLNSVKRSDRYRPSPELQPMPPLSKPPNGNIPPAMSSEEDSDEESNETAFHSPQNSSVSQEDGFYTPYSVSRQSSLSNGSPAKKESNSTVTPLPKSKRTSPKSKSALSASSPDIRHVIIPSIKQTPLPQRQQSEKQLTSSGGIGHSRKPKFSAPPPPPNLVHLQSTTNTVSHVSKTSLNHPPPPPPPPPPPPPLMTRKSVSPTQAVSASISRLSEGPGSVGSVTKGSEPVSDHVDESLNLRSSSERLVEEANETEGGKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCNNGTNSAPKPKEQGVRKSVLPSVDHENKVLDPKKSQNIAILLRALNVTRDEVSEALLDGSPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDSEINYLKKSFQTLEAASEELRNSRLFFKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGAETASTNGSIPNQMDSKFNEEEFKKNGLHVVAGLSKDLGNVKKAAGMDSDVLSSYVTKLETGLEKVRSVLQYEKPDMRGNFFNSTTLFLKYAEDEIVRIKSHEREALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGGASRSFRIASNAPLPVLNRYNGRQDRSSDEESSSP* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0570 908 ProSiteProfiles Formin homology-2 (FH2) domain profile. 456 883 IPR015425 -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 383 402 - -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 434 462 - -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 329 350 - -
Mtr5g0570 908 Pfam Formin Homology 2 Domain 459 857 IPR015425 -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 367 382 - -
Mtr5g0570 908 PANTHER FORMIN-RELATED 4 908 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mtr5g0570 908 MobiDBLite consensus disorder prediction 253 315 - -
Mtr5g0570 908 Gene3D Formin, FH2 domain 465 875 IPR042201 -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 49 71 - -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 82 108 - -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 220 234 - -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 46 111 - -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 183 462 - -
Mtr5g0570 908 PANTHER FORMIN-LIKE PROTEIN 4 908 - -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 403 431 - -
Mtr5g0570 908 SUPERFAMILY Formin homology 2 domain (FH2 domain) 388 867 - -
Mtr5g0570 908 MobiDBLite consensus disorder prediction 183 203 - -
Mtr5g0570 908 SMART it6_source 456 872 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0570 Mtr-Chr5 5495148 5500189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0570 457 898 FH2 protein (formin) Gene Family AT5G67470 71.685 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0570 - - mtr:MTR_5g015690 1630.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0570 5 5495148 5500189 Mtr5g0570 5 5495148 5500189 ECH
Mtr5g0570 5 5495148 5500189 Mtr4g3435 4 47871645 47875836 PCT