Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0568 ATGGGGAGCTATGTTGGCACCCCTTTTTCTTTGTCTAGTCTCATGTGTCATGAACAAGATGAATCCACTCTCATCTTTGAAGAAGATGAAGATGAATCCACTTTCTTCATCAACTCATCACTTGATAATAATAACAATAACCCTTGGTTTCTTTTGGATGATGAAGAAGAATACATTCAATATTTGTTCAAACAAGAAACAGGACTTGGATTTGGATCCATCACTCATTTTTTATGCTATGATGATCATGATGTTGAAGTTGAAGATGATGATTCAAGCAAAAGCTTATTCTGGTTGAGAAATGCTCGTTTGCATGCTATTGATTGGATTTTCAATACACAAGCTAAATTTGGATTCACAGTTCAAACAGCTTATTTATCAATCAATTATTTTGATCGGTTTCTTTCAAAACGATCCATTGATGAATCAAAACCTTGGGCTATTCAATTGTTGTCAGTTGCATGTTTATCAATTGCAGCAAAAATGGAAGAACAAAGTGTTCCTCCACTGTCAGAATATCCAATAGAATATCGATTTGAGAACAAAGTTATCAAGAACATGGAACTTTTGATTTTGAGTACTTTGGAATGGAAAATGGGATTACCAACCCCTTTTGCTTATTTACATTATTTCTTCACCAAGTTTTGCAATGGATCAAGATCAGAAACAATAATCACAAAAGCCACACAACACATTGTGACAATGGTCAAAGATTTTAATTTGATGAATCAACGACCATCTACAATTGCTTCTGCTTCTATATTAGCAGCTTTTGATTCCACGTTAACCAAAAAGGAAATTGATCTTCGGATTAGTTTAGTCTCATCATGTGGAAATCTAGAAAGTGAGCATGTATTTTCATGTTACAATGTTATACAAGAAAAGATTAGAGACAAAGTTAACAAGACGCCTTCATCGGATTTATTATCAACAGAATCAAATTCCACATGTGTTGTTGTTGAAAACAAATTTAATGCTTGTGTAGGAGTTAAGAGAAAGCTTAGTTATGAGGAGATGAACATTGAAGATTTTCCACCGGGACAAAAGCTACGTCAACCTTAA 1062 0.339 MGSYVGTPFSLSSLMCHEQDESTLIFEEDEDESTFFINSSLDNNNNNPWFLLDDEEEYIQYLFKQETGLGFGSITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSRSETIITKATQHIVTMVKDFNLMNQRPSTIASASILAAFDSTLTKKEIDLRISLVSSCGNLESEHVFSCYNVIQEKIRDKVNKTPSSDLLSTESNSTCVVVENKFNACVGVKRKLSYEEMNIEDFPPGQKLRQP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0568 353 CDD CYCLIN 103 192 IPR013763 -
Mtr5g0568 353 PANTHER CYCLINS 58 309 IPR039361 -
Mtr5g0568 353 Pfam Cyclin, N-terminal domain 101 199 IPR006671 -
Mtr5g0568 353 PANTHER CYCLIN-D5-1 58 309 - -
Mtr5g0568 353 Pfam Cyclin, C-terminal domain 202 301 IPR004367 -
Mtr5g0568 353 Gene3D - 201 289 - -
Mtr5g0568 353 SUPERFAMILY Cyclin-like 46 199 IPR036915 -
Mtr5g0568 353 SMART cyclin_7 108 193 IPR013763 -
Mtr5g0568 353 ProSitePatterns Cyclins signature. 103 134 IPR006671 -
Mtr5g0568 353 SMART Cyclin_C_2 202 337 IPR004367 -
Mtr5g0568 353 Gene3D - 101 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0568 Mtr-Chr5 5467983 5470179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0568 10 267 Core Cell Cycle Gene Families AT4G37630 37.269 5.23e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0568 K18811 - gmx:100798140 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0568 5 5467983 5470179 Mtr5g0568 5 5467983 5470179 ECH
Mtr5g0568 5 5467983 5470179 Mtr4g3436 4 47878137 47880015 ECH