Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0558 ATGGTAGAAACGACACACGTAGAACATGATGCAAATCTTCACCATTCATCACCACCTCTGGGCACCGATAATGTGAATATTACATCCAATCCAATGGTTGAAGGTGTAGAAAAATTGGTGAATGATATTGTGGAGCAGGCAAAAGAGAATATTGTTAGTAATGTACCACACTTAGAAATGGAGTTTGAGTCTGAGGCCTTGGCATATGAATTTTATAATGAGTATAGTAGGAAATGTGGTTTTGGTATCCGTCGAGAATATGCAAATAAAAGCAAAAAAGATGGAGTTCTTACTTCAAGAATATTTATGTGCTCCAAAGAGGGTAGATGCGGTGGTGACAAACGTGATTACTTGACAAAAGAGGCTCGAGCAGAAACTAGAACAGGATGTTTAGCACGTATGGTTATTTCACTTGTTCGGAAGATTGGAAAATACAAGGTTATTGACTCTGTAGCGAGACATAATCACCTTCTTCTGCCAGCTGAGAACAATCTCCAATAG 501 0.3872 MVETTHVEHDANLHHSSPPLGTDNVNITSNPMVEGVEKLVNDIVEQAKENIVSNVPHLEMEFESEALAYEFYNEYSRKCGFGIRREYANKSKKDGVLTSRIFMCSKEGRCGGDKRDYLTKEARAETRTGCLARMVISLVRKIGKYKVIDSVARHNHLLLPAENNLQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0558 166 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 26 158 - -
Mtr5g0558 166 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 158 - -
Mtr5g0558 166 MobiDBLite consensus disorder prediction 1 25 - -
Mtr5g0558 166 Pfam FAR1 DNA-binding domain 70 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0558 Mtr-Chr5 5363422 5364929 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr5g0558 FAR1 5.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0558 - - mtr:MTR_5g015480 330.102