Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0530 ATGAAAAAACTCATTTTCATTCTTCTCTTTTCACTAGTATGTTCAAATGGAACCACCTTTTCACTCTCAAGAGACTATGAAATTCTTCTTCATGTAAAGAACACACAAATTGATGACAAAAACAAAAGTCTCAATGATTGGCTTCCAAACACAGATCATAATCCTTGTAACTGGAGAGGCATAACCTGCGATTCGCGGAATAAATCCGTTGTATCAATCGACCTCACAGAAACCGGTATTTATGGTGATTTTCCATCTAATTTCTGTCATATTCCAACACTCCAAAATCTTTCACTTGCTACGAATTTTCTTGGTAATGCTATTTCCTCACATTCCATGCTACCCTGCTCCCACCTTCATTTCTTGAACATCTCCGACAACTTATTCGTTGGAGCCTTACCAGATTTCAACTCAGAAATCTTTGAACTAAGAGTACTTGACGCCACAGGAAACAACTTCTCCGGTGACATTCCAGCGAGTTTTGGCCGATTACCAAAACTGAATGTGCTCAATTTGTCTAATAACCTTTTCACAGGTGACATTCCAGTGAGTTTAGGCCAGTTTCCACAACTGAAGGTTCTCATTTTATCTGGAAACCTTTTCACCGGAACGATTCCTTCGTTCTTAGGTAATCTCAGTGAATTAACTTATTTTGAACTTGCTCATACAGAATCAATGAAACCAGGTCCTTTACCTTCTGAACTAGGAAATCTTACAAAGCTAGAATTTCTCTACCTTGCAAATATTAACCTCATAGGTAGCATACCAGATTCTATTGGGAACCTTATTTCCATCAAAAACTTCGATTTGTCACAGAATTCTTTGTCTGGTAAAATCCCAGAAACCATTTCTTGTATGAAAGATTTGGAACAGATTGAACTATATAATAACAATCTTTCAGGTGAAATTCCACAAGGTTTAACAAACCTTCCAAATTTGTTTCTCTTAGACCTTTCTCAGAACGCTCTCACCGGGAAATTGTCTGAAGAAATTGCTGCAATGAATCTTTCTATACTTCACTTGAACGACAATTTTCTCAGTGGAGAAGTTCCAGAAAGTTTAGCTTCAAATTCAAACTTAAAGGATCTGAAGCTTTTCAACAATAGTTTTTCTGGAAAACTTCCAAAGGATCTTGGAAAAAACTCTTCCATTCAAGAACTTGATGTTTCAACCAATAACTTCATTGGAGAGTTACCAAAGTTTCTCTGTCAAAAGAAAAAACTTCAAAGACTCGTCACATTCAAAAATCGATTTTCTGGGCCTATGCCTAATGAGTATGGCGAGTGTGATTCTCTTCATTATGTAAGAATCGAGAACAATGAATTCTCCGGCTCAGTTCCACCGAGGTTTTGGAACCTTCCGAAGCTTAATACAGTGATAATGGATCACAACAAGTTCGAAGGTTCAGTTTCTAGTTCAATCTCAAGAGCAAAGGGAATCGAGAAACTGGTTTTAGCCGGTAACAGGTTTTCCGGTGAGTTTCCGGCAGGAGTCTGTGAACATGTTGAGCTAGTGCTAATTGACATTGGAAATAACCGGTTTACTGGTGAGGTCCCTACCTGCATAACCGGTTTGAAAAAGTTGCAGAAGCTTAAAATGCAAGAAAACATGTTCACTGGAAAAATTCCCGGTAATGTTACTTCATGGACTGAATTAACGGAGTTAAACTTGTCGCATAACCTGTTATCCAGTTCAATTCCACCGGAACTTGGTAAATTACCTGACTTAATTTACCTTGATCTCTCCGTTAATTCTTTAACGGGGAAGATTCCGGTGGAGTTAACAAACTTAAAGTTGAATCAGTTCGATGTTTCTGATAACAAATTATCCGGTGAGGTTCCTTCCGGTTTTAACCACGAAGTTTATTTGTCAGGTCTAATGGGAAATCCAGGTTTATGTAGCAATGTTATGAAAACCTTAAATCCTTGTTCAAAACACAGACGGTTTTCTGTTGTGGCAATAGTTGTTTTATCTGCTATTCTTGTGTTGATTTTTCTGTCTGTTTTGTGGTTCTTGAAGAAAAAGTCGAAATCTTTTGTTGGAAAATCCAAACGGGCTTTTATGACAACAGCTTTTCAGAGAGTTGGGTTCAATGAGGAAGATATAGTACCTTTTTTAACCAATGAGAATTTGATTGGAAGAGGTGGGTCAGGTCAGGTTTATAAGGTGAAGGTGAAAACAGGTCAAATAGTTGCAGTGAAAAAGCTTTGGGGTGGTGGAACACATAAACCTGATACAGAATCTGAGTTTAAGTCAGAGATTGAAACATTGGGTAGAATTAGACATGCTAATATAGTGAAACTGTTGTTTTGTTGTAGTTGTGATGATTTCAGAATATTGGTGTATGAGTTTATGGAAAATGGGAGTTTAGGTGATGTTTTGCATGAGGGGAAGTTTGTGGAGTTGGATTGGTCTAAGAGATTTGGAATTGCTTTAGGTGCTGCTAAAGGGTTGGCTTATTTACACCATGATTGTGTTCCTGCTATTGTTCATAGGGATGTGAAGAGTAATAACATATTGCTTGATCATGATTTTGTTCCTCGTGTTGCTGATTTTGGACTTGCTAAGACATTGCAGCATGAGGGAAATGAAGGTGCTATGTCTAGAGTTGCTGGTTCATATGGTTACATTGCTCCTGAATATGGTTATACACTGAAAGTGACTGAGAAGAGTGATGTGTATAGTTATGGTGTGGTGTTGATGGAATTGATCACTGGGAAGAGACCAAATGATTCTTGCTTTGGTGAGAACAAAGATATTGTGAAGTGGGTCACTGAGATTGCTTTATCAACAACTCATGAAGGAGGAGGAAGTGGCAACATTGGAAGAGGCTACGATTGTGTTATAACACAGATTGTGGACCCAAGATTGAACTTAGACACTTGTGATTACGAAGAGGTTGAGAAGGTGTTAAATGTGGCTCTACTTTGTACCTCAGCATTTCCAATTAGTAGGCCCTCAATGAGAAAAGTGGTTGAATTGCTCAAGGACCAGAAATGGGCTCTCCCCAAGCCATGA 3018 0.383 MKKLIFILLFSLVCSNGTTFSLSRDYEILLHVKNTQIDDKNKSLNDWLPNTDHNPCNWRGITCDSRNKSVVSIDLTETGIYGDFPSNFCHIPTLQNLSLATNFLGNAISSHSMLPCSHLHFLNISDNLFVGALPDFNSEIFELRVLDATGNNFSGDIPASFGRLPKLNVLNLSNNLFTGDIPVSLGQFPQLKVLILSGNLFTGTIPSFLGNLSELTYFELAHTESMKPGPLPSELGNLTKLEFLYLANINLIGSIPDSIGNLISIKNFDLSQNSLSGKIPETISCMKDLEQIELYNNNLSGEIPQGLTNLPNLFLLDLSQNALTGKLSEEIAAMNLSILHLNDNFLSGEVPESLASNSNLKDLKLFNNSFSGKLPKDLGKNSSIQELDVSTNNFIGELPKFLCQKKKLQRLVTFKNRFSGPMPNEYGECDSLHYVRIENNEFSGSVPPRFWNLPKLNTVIMDHNKFEGSVSSSISRAKGIEKLVLAGNRFSGEFPAGVCEHVELVLIDIGNNRFTGEVPTCITGLKKLQKLKMQENMFTGKIPGNVTSWTELTELNLSHNLLSSSIPPELGKLPDLIYLDLSVNSLTGKIPVELTNLKLNQFDVSDNKLSGEVPSGFNHEVYLSGLMGNPGLCSNVMKTLNPCSKHRRFSVVAIVVLSAILVLIFLSVLWFLKKKSKSFVGKSKRAFMTTAFQRVGFNEEDIVPFLTNENLIGRGGSGQVYKVKVKTGQIVAVKKLWGGGTHKPDTESEFKSEIETLGRIRHANIVKLLFCCSCDDFRILVYEFMENGSLGDVLHEGKFVELDWSKRFGIALGAAKGLAYLHHDCVPAIVHRDVKSNNILLDHDFVPRVADFGLAKTLQHEGNEGAMSRVAGSYGYIAPEYGYTLKVTEKSDVYSYGVVLMELITGKRPNDSCFGENKDIVKWVTEIALSTTHEGGGSGNIGRGYDCVITQIVDPRLNLDTCDYEEVEKVLNVALLCTSAFPISRPSMRKVVELLKDQKWALPKP* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0530 1005 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 164 1001 - -
Mtr5g0530 1005 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 162 - -
Mtr5g0530 1005 Gene3D Ribonuclease Inhibitor 331 649 IPR032675 -
Mtr5g0530 1005 ProSiteProfiles Protein kinase domain profile. 706 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0530 1005 SUPERFAMILY L domain-like 334 653 - -
Mtr5g0530 1005 Gene3D Transferase(Phosphotransferase) domain 1 785 1001 - -
Mtr5g0530 1005 ProSiteProfiles Leucine-rich repeat profile. 551 574 IPR001611 GO:0005515
Mtr5g0530 1005 Gene3D Ribonuclease Inhibitor 141 226 IPR032675 -
Mtr5g0530 1005 Pfam Leucine rich repeat 142 200 IPR001611 GO:0005515
Mtr5g0530 1005 Gene3D Ribonuclease Inhibitor 227 330 IPR032675 -
Mtr5g0530 1005 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 164 1001 - -
Mtr5g0530 1005 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 9 162 - -
Mtr5g0530 1005 Gene3D Ribonuclease Inhibitor 24 140 IPR032675 -
Mtr5g0530 1005 SMART LRR_typ_2 238 262 IPR003591 -
Mtr5g0530 1005 SMART LRR_typ_2 310 334 IPR003591 -
Mtr5g0530 1005 SMART LRR_typ_2 164 188 IPR003591 -
Mtr5g0530 1005 SMART LRR_typ_2 549 573 IPR003591 -
Mtr5g0530 1005 SUPERFAMILY Protein kinase-like (PK-like) 706 995 IPR011009 -
Mtr5g0530 1005 ProSitePatterns Protein kinases ATP-binding region signature. 712 735 IPR017441 GO:0005524
Mtr5g0530 1005 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Mtr5g0530 1005 SMART serkin_6 706 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0530 1005 Pfam Protein kinase domain 708 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0530 1005 SUPERFAMILY RNI-like 72 419 - -
Mtr5g0530 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672|GO:0006468
Mtr5g0530 1005 Gene3D Phosphorylase Kinase; domain 1 697 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0530 Mtr-Chr5 5001674 5006164 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0530 13 999 Receptor kinase-like Gene Family AT5G65710 52.579 0.0 1006
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr5g0530 Pkinase 7.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0530 - - mtr:MTR_5g014720 1984.53