Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0528 ATGCGTTTCCTTCTTCTCCTTTTCTTTCTCTTCCATTTCCACTACCACCATGTTCTCTCTGCATCTGCACCAATCTCAGAATACCGTGCACTTCTCTCTTTCCGTCAATCAATTACCGATTCTACCCCTCCTTCACTCTCTTCATGGAACACTAACACCACACACTGCACGTGGTTCGGTGTTACATGCAACACGCGCCGCCATGTCACCGCCGTTAACCTCACCGGACTTGACCTCTCCGGCACACTCTCTGACGAGCTCTCTCATCTCCCATTTCTCACTAACCTCTCGTTAGCTGACAACAAATTCTCCGGCCAAATCCCGCCGTCGCTCTCCGCCGTCACTAACCTCCGTCTCCTCAACCTCTCCAACAATGTCTTCAACGGAACTTTCCCTTCCGAGCTTTCTCTTCTCAAAAACCTTGAAGTTCTTGATCTCTACAACAACAACATGACCGGAACTCTTCCTCTCGCCGTAACGGAGTTACCAAATCTCCGTCATCTTCATCTCGGAGGTAACTACTTAACCGGCCAGATCCCGCCGGAGTATGGTTCATGGCAGCATTTACAGTACTTAGCAGTTTCCGGTAACGAACTCGACGGAACAATTCCACCGGAGATCGGAAACTTAACAAGTCTCCGGGAGCTTTACATCGGATACTTCAACGAGTACACCGGCGGCATTCCGCCGCAAATCGGAAACTTAACAGAACTCATCCGTCTCGACGCGGCGTACTGTGGTTTATCCGGTGAGATACCACATGAAATCGGTAAACTTCAAAACCTAGATACACTGTTTCTTCAGGTGAATGCACTTTCAGGCTCTTTAACATGGGAACTTGGAAATTTGAAGAGCTTAAAATCAATGGATTTGTCTAATAACATGTTAACCGGTGAGATTCCGACGAGTTTCGGTGAACTGAAGAATTTAACACTTTTGAATTTGTTCAGAAACAAGCTTCATGGTGCTATACCGGAGTTTATCGGTGATATGCCGGCGTTGGAGGTTATTCAGTTATGGGAGAATAACTTCACCGGTAATATTCCGATGAGTTTGGGAACAAATGGAAAATTGTCTCTTTTGGACATTTCATCAAACAAGTTAACTGGAACACTTCCACCTTATTTGTGTTCTGGGAATATGCTTCAAACTTTGATAACTCTTGGGAATTTTTTGTTCGGTCCAATTCCTGAATCTCTTGGTGGTTGTGAATCATTGACTCGGATTCGAATGGGTGAAAATTTTTTCAATGGTTCAATTCCTAAGGGTTTGTTTGGATTACCAAAATTGAGTCAGGTTGAGCTTCAAGATAATTATTTATCTGGAAATTTTCCTGAGACTCATTCTGTTTCTGTTAATCTTGGTCAGATTACTTTGTCGAATAATCAACTCTCAGGTCCTTTGCCTCCTTCTATTGGGAATTTTTCGGGCGTGCAGAAGCTTCTGCTTGATGGTAACATGTTTGAGGGTAAAATTCCATCTCAGATTGGAAGGTTGCAACAGCTTTCAAAGATTGATTTTAGTCATAACAGGTTTTCTGGTCCGATTGCACCGGAGATTAGTAAATGCAAGCTGTTAACTTTTGTTGATCTTAGTCGAAATGAGTTATCTGGGATTATCCCTAATGAGATAACTCATATGAAGATATTGAATTACTTCAATATTTCTAGAAATCATTTGGTTGGTAGTATTCCGGGTTCTATAGCGTCGATGCAGAGTTTAACTTCTGTTGATTTTTCGTATAATAATCTATCTGGTTTGGTTCCTGGCACTGGTCAATTTAGTTACTTTAACTATACGTCTTTCTTGGGAAACCCTGATCTATGTGGACCTTATTTGGGTGCTTGTAAAGATGGTGTTCTTGATGGTCCTAACCAACTTCATCATGTTAAGGGTCATCTTTCTTCTACTGTGAAGCTGTTGCTTGTTATTGGGTTGCTTGCATGTTCGATTGTGTTTGCTATTGCAGCAATAATCAAGGCTCGGTCTTTGAAGAAGGCTAGTGAGGCTCGTGCATGGAAATTGACTTCATTCCAACGTTTGGAATTCACTGCTGACGATGTTTTAGATTCCTTGAAGGAGGATAACATCATAGGAAAAGGAGGTGCTGGCATTGTCTACAAAGGGGCAATGCCGAATGGGGAACTTGTTGCTGTTAAAAGGCTTCCGGTTATGAGCAGAGGCTCTTCTCATGATCATGGATTCAATGCTGAGATTCAGACACTGGGGAGAATTAGACATAGGCACATTGTTAGGTTGTTGGGTTTCTGTTCAAACCATGAGACAAATCTTTTGGTTTATGAGTACATGCCTAATGGAAGTTTAGGCGAAGTTCTCCATGGAAAGAAAGGCGGTCATTTGTATTGGGATACAAGGTATAAAATTGCTGTGGAGGCTGCAAAGGGACTTTGCTATCTACACCATGATTGTTCCCCGCTTATTGTTCATCGAGATGTGAAATCAAACAACATCCTTCTTGATTCTAATTATGAAGCCCATGTTGCTGATTTTGGACTTGCCAAGTTCTTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATTGCTGGTTCATATGGATACATAGCTCCAGAGTATGCCTATACATTGAAAGTTGATGAGAAAAGCGATGTATACAGCTTCGGTGTTGTTCTTTTAGAGCTTGTAACTGGAAGGAAACCAGTTGGAGAATTTGGCGACGGGGTGGACATTGTGCAATGGGTCAGAAAAATGACAGATTCCAACAAGGAAGGAGTTCTAAAAGTTCTTGATCCAAGACTTTCCTCAGTTCCTCTCCAGGAGGTCATGCATGTTTTCTATGTAGCCATTCTGTGTGTTGAAGAACAAGCAGTAGAAAGGCCAACTATGCGCGAAGTTGTTCAAATTCTGACTGAGCTTCCGAAGTCAACCGAGTCTAAACTAGGAGACTCAACAATTACAGAATCGTCTTTGTCATCATCAAATGCTTTAGAATCTCCAACTGCAGCCTCTAAGGATCATCAACATCCTCCTCAATCACCACCGCCGGATCTCCTAAGCATTTGA 3045 0.425 MRFLLLLFFLFHFHYHHVLSASAPISEYRALLSFRQSITDSTPPSLSSWNTNTTHCTWFGVTCNTRRHVTAVNLTGLDLSGTLSDELSHLPFLTNLSLADNKFSGQIPPSLSAVTNLRLLNLSNNVFNGTFPSELSLLKNLEVLDLYNNNMTGTLPLAVTELPNLRHLHLGGNYLTGQIPPEYGSWQHLQYLAVSGNELDGTIPPEIGNLTSLRELYIGYFNEYTGGIPPQIGNLTELIRLDAAYCGLSGEIPHEIGKLQNLDTLFLQVNALSGSLTWELGNLKSLKSMDLSNNMLTGEIPTSFGELKNLTLLNLFRNKLHGAIPEFIGDMPALEVIQLWENNFTGNIPMSLGTNGKLSLLDISSNKLTGTLPPYLCSGNMLQTLITLGNFLFGPIPESLGGCESLTRIRMGENFFNGSIPKGLFGLPKLSQVELQDNYLSGNFPETHSVSVNLGQITLSNNQLSGPLPPSIGNFSGVQKLLLDGNMFEGKIPSQIGRLQQLSKIDFSHNRFSGPIAPEISKCKLLTFVDLSRNELSGIIPNEITHMKILNYFNISRNHLVGSIPGSIASMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVLDGPNQLHHVKGHLSSTVKLLLVIGLLACSIVFAIAAIIKARSLKKASEARAWKLTSFQRLEFTADDVLDSLKEDNIIGKGGAGIVYKGAMPNGELVAVKRLPVMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLYWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLSSVPLQEVMHVFYVAILCVEEQAVERPTMREVVQILTELPKSTESKLGDSTITESSLSSSNALESPTAASKDHQHPPQSPPPDLLSI* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0528 1014 Gene3D Ribonuclease Inhibitor 178 278 IPR032675 -
Mtr5g0528 1014 Gene3D Ribonuclease Inhibitor 26 177 IPR032675 -
Mtr5g0528 1014 Pfam Leucine Rich Repeat 285 307 IPR001611 GO:0005515
Mtr5g0528 1014 SMART LRR_typ_2 90 114 IPR003591 -
Mtr5g0528 1014 SMART LRR_typ_2 162 186 IPR003591 -
Mtr5g0528 1014 SMART LRR_typ_2 283 306 IPR003591 -
Mtr5g0528 1014 SMART LRR_typ_2 571 594 IPR003591 -
Mtr5g0528 1014 SMART LRR_typ_2 307 331 IPR003591 -
Mtr5g0528 1014 SMART LRR_typ_2 356 379 IPR003591 -
Mtr5g0528 1014 SMART LRR_typ_2 138 161 IPR003591 -
Mtr5g0528 1014 Gene3D Ribonuclease Inhibitor 279 358 IPR032675 -
Mtr5g0528 1014 Pfam Leucine Rich repeats (2 copies) 139 178 IPR025875 -
Mtr5g0528 1014 SUPERFAMILY RNI-like 72 409 - -
Mtr5g0528 1014 MobiDBLite consensus disorder prediction 971 1014 - -
Mtr5g0528 1014 ProSiteProfiles Protein kinase domain profile. 692 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0528 1014 Pfam Protein kinase domain 694 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0528 1014 Gene3D Phosphorylase Kinase; domain 1 657 769 - -
Mtr5g0528 1014 Gene3D Transferase(Phosphotransferase) domain 1 770 987 - -
Mtr5g0528 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 1004 - -
Mtr5g0528 1014 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Mtr5g0528 1014 SUPERFAMILY Protein kinase-like (PK-like) 687 963 IPR011009 -
Mtr5g0528 1014 SUPERFAMILY L domain-like 300 616 - -
Mtr5g0528 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Mtr5g0528 1014 MobiDBLite consensus disorder prediction 971 1001 - -
Mtr5g0528 1014 Gene3D Ribonuclease Inhibitor 359 619 IPR032675 -
Mtr5g0528 1014 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1004 - -
Mtr5g0528 1014 SMART serkin_6 692 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0528 Mtr-Chr5 4982046 4986182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0528 14 993 Receptor kinase-like Gene Family AT5G65700 79.879 0.0 1588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr5g0528 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0528 - - ccaj:109800149 1699.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0528 5 4982046 4986182 Mtr4g3475 4 48312692 48316776 PCT