Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0524 ATGGCAGCGGCGATGGCGTCAAAAGGGGATTCTTCTCTTGTCTCTGAAAAAACCAGATATAGATCTGAATCAGTTTATGGTACATGCAGAATAATTGGCGGAGATGGATTGACGGACAATACTTCAGTCATAGGAGATGCTATCAAGCATGTGAAAGAGCTCCAGGAACGTTTGAGAGTATTAGAAGAAGAGAACAAGAATAGTCATATTGAATCTGTAGTGACGCTTAACAAATTGCTGCTAATTTACAAGTCATGGAGTGATGATGGTTCTAAGGCTGCTAGTGCTAATAATGAATCTCTCCCTCACGTGGATGCCAAAATTTTGGACAAAAACGTGCTCATAAGGATCCAGTGCCAAAAGCAAAAGAGTTATTTGCTTAATAAATTGGTTGAGATTCAAAAGCTCCATCTCTTTGTTGTTAATAGCAGCGTCCTAGCTATTGGGGATTCTATCCTTGACATAACAATCATTGCTCGGGCTCACATTTAA 492 0.3984 MAAAMASKGDSSLVSEKTRYRSESVYGTCRIIGGDGLTDNTSVIGDAIKHVKELQERLRVLEEENKNSHIESVVTLNKLLLIYKSWSDDGSKAASANNESLPHVDAKILDKNVLIRIQCQKQKSYLLNKLVEIQKLHLFVVNSSVLAIGDSILDITIIARAHI* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0524 163 PANTHER BHLH TRANSCRIPTION FACTOR 38 160 - -
Mtr5g0524 163 Gene3D - 24 162 IPR023214 -
Mtr5g0524 163 Gene3D - 52 117 - -
Mtr5g0524 163 Coils Coil 44 71 - -
Mtr5g0524 163 PANTHER BHLH TRANSCRIPTION FACTOR 38 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0524 Mtr-Chr5 4914028 4916086 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0524 7 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.654 3.10e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0524 - - mtr:MTR_5g014550 290.041