Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr5g0516 | ATGGATTCGTGTGAACCACCACACTCTCCTCACCCTTACCAACTTCAACCGAAAAATATTGTACCAGTAGGCCCTAACCCATTCACAAACACTTCCCCAATCACCATGATAACACCAACAACCGCTCAATTCCCTTTGTCCAACATCAATACTAATCCTTTACCTCAATATGAGCATTTATCCTTGATGCTATTTGTGGGGGCTTCTTCCTCTGGATCTGGTTCGTTTAAGAGAAAGAGGGGAAGACCTAGGAAGTATTTTCCTAATGGCAAAATTACTTTGGGATCAAGCTTGGACCCAACACATGCTGCATCATTTGCTTCTCCTTCTTCATCTGCTGTGAAGAAGAATACCAGCGGAAGGGGAAGGGGAAGGCCCAGGAAGTATTTTCCTAATGGAAAAATAACTTTGGGGTCAAGCTTGGACCCAACACATGCTGCAACTTTTGCTTCTCCTTCTTCATCTGCTGTGAAGAAGAATACCAGCATAAGGGGAAAGGGAAAGCCTCGTGGATCTTTTAAGAAGAAACTACCTATTGAAATGTCAGGAGTTACTAATGGCTCTGGTTTCTCTCCACATGTGATCATTGTGAACCGTGGAGAGGACATTGTAGCTAAAGTTGGGGCCTTTTGTCAGGGAGGACCTAATACAGATATGTGCATTCTTTCTGCTCATGGTTTGGTTGGCAATGCTGCCCTTTATCAGTCAGGGTCCGTTGTTACTTACGAGGGTCGGTTTGAAATCATCTCATTGTCAGGAAATTTAGAAGTATCTGACAACACCACTAAATTTAAGAAAATGGGTTACTTCAAGGTGTCTCTCGAGGGTCATGGTTCACGCCTTTTGGCAGGCGTAGTTGCTGATAAGCTTATTGCAGCATCATTAGTAAAGGTTACTATTGGTGTTTTTACTTTGGATTGCAAAAAGGCTAGCTCCAATTATCTGAAACTTGGATCTTCTTCGGTGCCACCATCCCAAATTGCTGCTTTTGGGACTCTAACTAGTGATGCATATCAAGGGCCATCATCTGACTCCTCTGGTGACAATGATAATATTCCTTTTAATCAACTTCCTGGAATCAACAACAATGCTACTCATCCAATTCCAACTATGTCGATGTACCAGGAACTGTGGGATCGCCAAACTCAACAGTGA | 1155 | 0.4303 | MDSCEPPHSPHPYQLQPKNIVPVGPNPFTNTSPITMITPTTAQFPLSNINTNPLPQYEHLSLMLFVGASSSGSGSFKRKRGRPRKYFPNGKITLGSSLDPTHAASFASPSSSAVKKNTSGRGRGRPRKYFPNGKITLGSSLDPTHAATFASPSSSAVKKNTSIRGKGKPRGSFKKKLPIEMSGVTNGSGFSPHVIIVNRGEDIVAKVGAFCQGGPNTDMCILSAHGLVGNAALYQSGSVVTYEGRFEIISLSGNLEVSDNTTKFKKMGYFKVSLEGHGSRLLAGVVADKLIAASLVKVTIGVFTLDCKKASSNYLKLGSSSVPPSQIAAFGTLTSDAYQGPSSDSSGDNDNIPFNQLPGINNNATHPIPTMSMYQELWDRQTQQ* | 385 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr5g0516 | 384 | MobiDBLite | consensus disorder prediction | 72 | 135 | - | - | |
Mtr5g0516 | 384 | Gene3D | - | 192 | 317 | - | - | |
Mtr5g0516 | 384 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Mtr5g0516 | 384 | CDD | DUF296 | 192 | 303 | IPR005175 | - | |
Mtr5g0516 | 384 | MobiDBLite | consensus disorder prediction | 148 | 174 | - | - | |
Mtr5g0516 | 384 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 116 | 384 | IPR039605 | GO:0003680 | |
Mtr5g0516 | 384 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 31 | 121 | IPR039605 | GO:0003680 | |
Mtr5g0516 | 384 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 | 116 | 384 | - | - | |
Mtr5g0516 | 384 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 | 31 | 121 | - | - | |
Mtr5g0516 | 384 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 188 | 304 | - | - | |
Mtr5g0516 | 384 | MobiDBLite | consensus disorder prediction | 338 | 361 | - | - | |
Mtr5g0516 | 384 | ProSiteProfiles | PPC domain profile profile. | 187 | 325 | IPR005175 | - | |
Mtr5g0516 | 384 | SMART | AT_hook_2 | 120 | 132 | IPR017956 | GO:0003677 | |
Mtr5g0516 | 384 | SMART | AT_hook_2 | 77 | 89 | IPR017956 | GO:0003677 | |
Mtr5g0516 | 384 | MobiDBLite | consensus disorder prediction | 94 | 118 | - | - | |
Mtr5g0516 | 384 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 192 | 303 | IPR005175 | - | |
Mtr5g0516 | 384 | PRINTS | AT-hook-like domain signature | 77 | 87 | IPR017956 | GO:0003677 | |
Mtr5g0516 | 384 | PRINTS | AT-hook-like domain signature | 118 | 129 | IPR017956 | GO:0003677 | |
Mtr5g0516 | 384 | PRINTS | AT-hook-like domain signature | 165 | 175 | IPR017956 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr5g0516 | Mtr-Chr5 | 4816748 | 4820119 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr5g0516 | 83 | 369 | AT-hook Motif Nuclear Localized (AHL) Family | AT2G33620 | 36.424 | 1.76e-35 | 131 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr5g0516 | - | - | mtr:MTR_5g014360 | 746.503 |