Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0476 ATGAAGTGTTTCTTCTTCAAACAAAAATCTAAATCAGACCCAGATTTAAACCGTAAAAAGAAGAAAAATCATGCAAAAAAATCCATCAGTGCGCATTCATCACCAAGAAGCATAAAAGAATTGTACAAAGAGAAAGAACACAATTTCAGAGTTTTTACTCTTCAAGAGCTTGTAGATGCAACAAATGGTTTTAATAAGGTGTTGAAGATTGGAGAAGGAGGTTTTGGGAAAGTATATAGAGGAACAATTACTCCTGAAAATGGAATAGGTAACCCAATTGTGGTTGCCATAAAAAAACTCAATACTCGTGGATTTCAGGGTCATAAAGAATGGCTTGCAGAAGTTCAATTTCTAGGAATTGTGAATCACCCGAATTTGGTTAAGCTTTTGGGATATTGTTCTGTAGATGGTGAAAGTATCCAACGGTTGTTAGTGTATGAGTTTATGCCTAATAGGAGTTTAGAAGATCATCTTTTCAGTCGTTCTTTACCTACTTTGCCTTGGAAAATAAGATTGCAAATCATGCTTGGTGCTGCTCAAGGATTACAGTATTTACATGAGGGTTTGGAGATTCAGGTGATCTACAGAGATTTCAAATCATCAAATGTGCTGTTGGACAAGAAATTCCATCCCAAACTCTCAGATTTTGGTCTTGCTAGGGAGGGCCCAACAGGTGACCAAACTCATGTCTCTACTGCGGTAGTTGGGACAAGGGGTTATGCAGCACCAGAGTATATTGAAACAGGTCATTTAAAATCAAAGAGTGACATTTGGAGTTTTGGTGTGGTACTATATGAGATTCTCACAGGAAGAAGAACAATTGAAAGAACCCTTCCAAAAGTGGAACAAAAGCTTATAGAATGGGTTAAAAACTACCCTGCTGACAGTAGCAGATTCAGCTTAATAATAGACCCTCGACTCAGGAAGCAATATTCTCTTGATGCAGCTAGGAAAATTGCCAAGTTGGCAGATAGTTGCTTGAAGAAGAATGCTGAAGATAGGCCATCAATGAGTCAGATTGTGGAAAGTTTGAAACAAGCTTTGCAATGTTCATAA 1056 0.3769 MKCFFFKQKSKSDPDLNRKKKKNHAKKSISAHSSPRSIKELYKEKEHNFRVFTLQELVDATNGFNKVLKIGEGGFGKVYRGTITPENGIGNPIVVAIKKLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGESIQRLLVYEFMPNRSLEDHLFSRSLPTLPWKIRLQIMLGAAQGLQYLHEGLEIQVIYRDFKSSNVLLDKKFHPKLSDFGLAREGPTGDQTHVSTAVVGTRGYAAPEYIETGHLKSKSDIWSFGVVLYEILTGRRTIERTLPKVEQKLIEWVKNYPADSSRFSLIIDPRLRKQYSLDAARKIAKLADSCLKKNAEDRPSMSQIVESLKQALQCS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0476 351 PIRSF ILK 21 351 - -
Mtr5g0476 351 ProSitePatterns Protein kinases ATP-binding region signature. 70 99 IPR017441 GO:0005524
Mtr5g0476 351 SUPERFAMILY Protein kinase-like (PK-like) 47 342 IPR011009 -
Mtr5g0476 351 Gene3D Transferase(Phosphotransferase) domain 1 149 350 - -
Mtr5g0476 351 ProSiteProfiles Protein kinase domain profile. 64 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0476 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Mtr5g0476 351 MobiDBLite consensus disorder prediction 8 37 - -
Mtr5g0476 351 PANTHER OS01G0588500 PROTEIN-RELATED 11 349 - -
Mtr5g0476 351 PANTHER RECEPTOR-LIKE KINASE PLANT 11 349 - -
Mtr5g0476 351 Pfam Protein tyrosine and serine/threonine kinase 69 344 IPR001245 GO:0004672|GO:0006468
Mtr5g0476 351 CDD STKc_IRAK 70 346 - -
Mtr5g0476 351 Gene3D Phosphorylase Kinase; domain 1 43 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0476 Mtr-Chr5 4364590 4367487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0476 3 344 Glycoside Hydrolase AT3G07070 42.978 1.19e-94 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr5g0476 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0476 - K00924 gmx:100305403 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0476 5 4364590 4367487 Mtr5g0476 5 4364590 4367487 ECH
Mtr5g0476 5 4364590 4367487 Mtr4g3523 4 48979056 48982742 PCT