Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0468 ATGTTGTTTTATTACAGTGTAATGAAGGCTAATATTATCAAGGAAGAGCCTAAATGTACCCAAATGACAATTTTTTATGATGGGAAAATAATTGTGTTTGATGATATTCCAGCTGAAAAAGTCGAGGACATCATGGTCTTTTCCTCCGAAGGAACTACAACCTCTCGAAACCACAAAAATAACAACTATGCTTTCAGATTTGCTCAGAGCCACCCATCATTTCTTGCTAGAAATTCTGCCAACAATTCTGTTCAAGTACCGTCCTCACCTGTTATTTATGATTTACCAATGACTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAAAGGAAGGATAGAATTGCTGCAAAGGCACCATATCAAACAAGTAACCCAACAAACCTTAATAAGCCAATTAACGAATTCATGTCATGGCTCTCCTTGGCACCACAAATCAGAATGACTTGGTCTTAG 453 0.3775 MLFYYSVMKANIIKEEPKCTQMTIFYDGKIIVFDDIPAEKVEDIMVFSSEGTTTSRNHKNNNYAFRFAQSHPSFLARNSANNSVQVPSSPVIYDLPMTRKASLHRFLEKRKDRIAAKAPYQTSNPTNLNKPINEFMSWLSLAPQIRMTWS* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0468 150 Pfam tify domain 17 45 IPR010399 -
Mtr5g0468 150 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 142 IPR040390 -
Mtr5g0468 150 Pfam Jas motif 96 121 IPR018467 -
Mtr5g0468 150 SMART tify_2 15 50 IPR010399 -
Mtr5g0468 150 PANTHER PROTEIN TIFY 10A 15 142 - -
Mtr5g0468 150 ProSiteProfiles Tify domain profile. 15 50 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0468 Mtr-Chr5 4306127 4307465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0468 13 145 Tify Gene Family AT1G19180 37.857 1.12e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mtr5g0468 tify 4.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0468 K13464 - gmx:100802800 131.339