Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0467 ATGAATCGTCACATTCGTACACCTATGATGAATTTTCAACAAGTATATCCTCATCTCTTTCAACAAGAGATTTCAAATTTGGGAAATTCTAGTGTAATGAAAAAGGAAGAGCCTAGATGTGCACAAATGACAATTTTTTATGATGGGAAAGTAATTGTGTTTGATGATATTCCAGCTGAAAAAGTCAAGGGCATCATGGTCTTTTGCACCAAAGGAACTACTCCTACCTCTCATTCTCAAAACCACAACAATAACAACTATGCTTTCAGATTTGCTCAGAGTAACCCATCATTTCTTGCTATAAATTCAGCCAACAATTCTCTTCAAATGCCATCCACACCTGTTATTTATGATTTACCAATGACTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAAAGGAAGGATAGAATTGCTGCTAGGGCACCATATCAAACAAGTAACCAAAAAAACCATAATAAGCCAATTAATGAATTCATGTCATGGCTCTCCTTGGCACCACAATCACCACAAGACCACAGATCAGAATGTAGCTCCAGCTCTGTGTTTCTTTAA 555 0.3712 MNRHIRTPMMNFQQVYPHLFQQEISNLGNSSVMKKEEPRCAQMTIFYDGKVIVFDDIPAEKVKGIMVFCTKGTTPTSHSQNHNNNNYAFRFAQSNPSFLAINSANNSLQMPSTPVIYDLPMTRKASLHRFLEKRKDRIAARAPYQTSNQKNHNKPINEFMSWLSLAPQSPQDHRSECSSSSVFL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0467 184 Pfam tify domain 40 66 IPR010399 -
Mtr5g0467 184 Pfam Jas motif 120 145 IPR018467 -
Mtr5g0467 184 ProSiteProfiles Tify domain profile. 36 71 IPR010399 -
Mtr5g0467 184 PANTHER PROTEIN TIFY 10A 25 166 - -
Mtr5g0467 184 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 25 166 IPR040390 -
Mtr5g0467 184 SMART tify_2 36 71 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0467 Mtr-Chr5 4299388 4301899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0467 19 168 Tify Gene Family AT1G19180 35.220 6.50e-22 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mtr5g0467 tify 4.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0467 K13464 - gmx:100306332 159.073