Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0463 ATGAATTCGGAGCCATCAATGTCGGTTTGTGATGAACATTCTGAAGAAGAATTAGGGAAGCCAGTGATAGAAAATGGAGACTCAACTATTGTTGATCCGCCTAAGTTTAAGCGCCGGAAAGTTTCTGCTGTTCGTGATTTTCCGGAAGAATGTGGACCGTTTGGTTCTGCTGATGGTATGGGTGTTGAGGTTAAGAGTGGCAAAGATTTAGGTGGTGGTGATTCGGGTGAAGCTGATAGTCCCAACGATGAAAAGGATCCTCAAACTTTTGAGTTCAATGAAGAGTTATTTGTTGCAGACACTGTTGAACAAACAAGTGACTGTAGTTTGAAGAAGGAGGATCCTGTGGTCTTATCTGATCAAGTGGATGTGGGTAGTTTTGCCAACGATGAACCTGCAAAAGTGGAATTGGTGGGCGTAGAAGCTATGGATATTAGTTTTGAAACTGAAGACTGTAGCTTGAAAAAGGAAGATCCTGTGGTCTCATCTCATCGAGTGGATGGGGATATTTTGGTTAACGATGAAGCTTCAAAAGTGGAATTGGTGGGCATGGAAGCTGTGGATATGGAATTGGAAACTGAAGACTGTAGCTTGAGAAAGGAAGATCCCATGGTCTCATCTCATCAATTGGATATGCCTATTTTGGATAATAACGAAGATACAAAACTGACATTGGTGGGCATGGAGACTTTGGATGCGGAATTGGCAACTGAAAGCTGTAGTTTAAAGAACGAAAATGCAGAGATCTTATCTTATCAAATTGATGAGTCTACTTTGGCAAACGACGGACCTGCAGAACTGGCCTTGGTCGGTATGGAAACTTCAGATATGGAATTTACAACAGAAGGCTCCGTAAAACAAGATTTATCTTATATATCAGAGGCACTGGCTCCAGTTGGCGAGGTAGCTATGTCTGATAACTCAAAATCCTCGTTGTCCAATATCAATATAGGTGGTTCCAGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTACCCTCCTCGTAAAAAAGTTGCAGCGTTAAGAGATTTTCCACGTCTATGTGGACGCAATGCTCCCCGTCTCAGCCAGGATGAGTGTCTAAAGGAGCTCGCTTCTTTGAAAGAAGTTGCAGCTACTGACCTACAAGAAGTAGAAAATAACAAAAGAAAGTTTGCCAACCTTGTTGAAGCTGATTTTGAAGGGAATGCAGTCAAGAAGCTGGATGTAGCTGAACCATCTACTGAGATGAGATTGGCGCTGGATAATCATCATCAGGTTAAAGCGGAAAACATGAACACCGTTAAGGTCGAGGGAACATCAGAGCTAGATATTGATTACCCAGAACTCGAAAGTAGTTTGAAGGTCTCACCAGGCAGGAAAGTAGTGCTAGGTTTGAGGGCGACGTCAGAATGTCCTTTGGAATCTGATATTTGTTCCCCCAAATTTAAACCAACATCTATTGGTGGTACAGATGACCGGAAGGGAAAGAAAGTTGATTTTTATGCCCACCTGGACAGATCTAAAACTGCGACCAAGTCCAAAGGTGTAATGAATCATTCTGGGCACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGATGACATGGGTCAATTAGTAACACGGGAGAAGAATTCTCTAGATCCTAATGAAAATAACAAACACTTTAAAAGTGTCCCAAAACCACGTGGTTATGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTAAGTGGTCATGAGAGTGACTCAGTGGCCCGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCAAGCTGTTTGTAGAAAGCTTTTGCAGGAAGCGGAAGCAAAACCAAAGTCAAATGTGAAAGAATCAAAGAGGGTTGATTTACAAGCTTCAAAAATACTTAAGGAGAAAGGGAGCTATGTTAATGAAGGGGAGAAGATCATGGGATCTGTTCCTGGGGTTGAAGTTGGTGATGAATTTCAATACAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATATGAAGCAAAAAAACAAGGTCCTTGCAACTAGTATTGTTGCTTCGGGGGGCTATGCTGATGACTTGGATAATGCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAGAAGCTTGAACGGGGCAATCTTGCTTTGAAGAACAGTAGTGAGGTCAAGAATTCTGTTAGGGTGATACGGGGCTCTGAATCAGCGGATGGAAAAAGCAGGATATATGTTTACGATGGACTCTATGAAGTTGAGTCATATTGGCAGGATATGGGGCCACATGGGAAGCTGGTTTATAAGTTTCGCTTGCGAAGAAAGCCGGGTCAACCAGAGCTTGCTTGGAAGGAACTGAAGAAATCTAAAAAGTTGTCCAAAACAAGAGAAGGTCTATCCGTTGTTGATATTTCCTACGGGAAAGAGAAAATTCCCATATGTGCTGTGAACACCATAGATAACGAGAAACCCCCTCCATTTAAATACATAACTAAGATGATGTATCCTGATTGTTGCAATATTGTCCCTCCAAAAGGCTGTAATTGTACTAATGGATGCTCTGACCATGAGAAATGTTCTTGTGTACTCAAAAATGGGGGGGAGATTCCATTTAATCATAATGGAGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGGCCTAAATGCGAGTGCCCTCCAACCTGTTATAATAGAGTCAGCCAACTTGGCATAAATATTCAACTCGAAATTTTTAAAACCAAGTCAATGGGATGGGGTGTAAGATCCTTGAATTCCATCCCTTCTGGAAGTTTTATCTGTGAATATATTGGAGAGGTTCTTGAGGACAAGGAAGCTGAACAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACAAAAACAACAGTAATCTTTGGGATGGACTTTCGAACCTTTTGCCAGATTCGCACTTAAGTTCAAGTGAAGTAGTGAATGATGTTGGCTTCACTATCGATGCCGCTCAGTTTGGTAATGTGGGGAGATTCATTAACCATAGTTGCTCCCCCAATCTCTATGCCCAGAATGTCCTTTATGATCACCATGACAACAGGGTTCCTCATGTCATGTTATTTGCTGCCGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGATTACAATTACACGATAGATCAAGTTCGTGATTCTGATGGGAAAATCAAAAAGAAATACTGCTTTTGTGGTTCTGTGGAATGTACTGGTTTCCTCTATCGGAGGTAA 3276 0.4145 MNSEPSMSVCDEHSEEELGKPVIENGDSTIVDPPKFKRRKVSAVRDFPEECGPFGSADGMGVEVKSGKDLGGGDSGEADSPNDEKDPQTFEFNEELFVADTVEQTSDCSLKKEDPVVLSDQVDVGSFANDEPAKVELVGVEAMDISFETEDCSLKKEDPVVSSHRVDGDILVNDEASKVELVGMEAVDMELETEDCSLRKEDPMVSSHQLDMPILDNNEDTKLTLVGMETLDAELATESCSLKNENAEILSYQIDESTLANDGPAELALVGMETSDMEFTTEGSVKQDLSYISEALAPVGEVAMSDNSKSSLSNINIGGSSACMKEALTKRYPPRKKVAALRDFPRLCGRNAPRLSQDECLKELASLKEVAATDLQEVENNKRKFANLVEADFEGNAVKKLDVAEPSTEMRLALDNHHQVKAENMNTVKVEGTSELDIDYPELESSLKVSPGRKVVLGLRATSECPLESDICSPKFKPTSIGGTDDRKGKKVDFYAHLDRSKTATKSKGVMNHSGHQPLKKKRENSSSDDMGQLVTREKNSLDPNENNKHFKSVPKPRGYVNVFPLGRSNLSGHESDSVARNKVRKTLRLFQAVCRKLLQEAEAKPKSNVKESKRVDLQASKILKEKGSYVNEGEKIMGSVPGVEVGDEFQYRIELNIIGLHRQIQGGIDYMKQKNKVLATSIVASGGYADDLDNADVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGSESADGKSRIYVYDGLYEVESYWQDMGPHGKLVYKFRLRRKPGQPELAWKELKKSKKLSKTREGLSVVDISYGKEKIPICAVNTIDNEKPPPFKYITKMMYPDCCNIVPPKGCNCTNGCSDHEKCSCVLKNGGEIPFNHNGAIVEAKPLVYECGPKCECPPTCYNRVSQLGINIQLEIFKTKSMGWGVRSLNSIPSGSFICEYIGEVLEDKEAEQRTGNDEYLFDIGNNKNNSNLWDGLSNLLPDSHLSSSEVVNDVGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHHDNRVPHVMLFAAENIPPLQELTYDYNYTIDQVRDSDGKIKKKYCFCGSVECTGFLYRR* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0463 1091 SMART G9a_1 634 786 IPR003105 -
Mtr5g0463 1091 MobiDBLite consensus disorder prediction 503 532 - -
Mtr5g0463 1091 SMART preset_2 809 900 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr5g0463 1091 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 565 1086 - -
Mtr5g0463 1091 ProSiteProfiles Pre-SET domain profile. 853 913 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr5g0463 1091 MobiDBLite consensus disorder prediction 1 87 - -
Mtr5g0463 1091 SMART set_7 916 1065 IPR001214 GO:0005515
Mtr5g0463 1091 Pfam Pre-SET motif 812 908 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr5g0463 1091 Coils Coil 361 381 - -
Mtr5g0463 1091 MobiDBLite consensus disorder prediction 31 46 - -
Mtr5g0463 1091 Pfam SET domain 927 1059 IPR001214 GO:0005515
Mtr5g0463 1091 ProSiteProfiles YDG domain profile. 639 782 IPR003105 -
Mtr5g0463 1091 Pfam SAD/SRA domain 638 786 IPR003105 -
Mtr5g0463 1091 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 486 1090 IPR025794 GO:0016571
Mtr5g0463 1091 ProSiteProfiles Post-SET domain profile. 1073 1089 IPR003616 -
Mtr5g0463 1091 SUPERFAMILY SET domain 799 1065 IPR046341 -
Mtr5g0463 1091 MobiDBLite consensus disorder prediction 537 556 - -
Mtr5g0463 1091 SUPERFAMILY PUA domain-like 624 795 IPR015947 -
Mtr5g0463 1091 CDD SET_AtSUVH-like 833 1060 - -
Mtr5g0463 1091 Gene3D SET domain 804 1089 IPR046341 -
Mtr5g0463 1091 ProSiteProfiles SET domain profile. 916 1059 IPR001214 GO:0005515
Mtr5g0463 1091 Gene3D - 621 803 IPR036987 -
Mtr5g0463 1091 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 565 1086 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0463 Mtr-Chr5 4262048 4266617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0463 581 1086 Su(var)3-9 homologs AT5G04940 41.120 3.75e-121 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr5g0463 SAD_SRA 1.3e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0463 K11420 - gmx:100803378 1112.44