Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0449 ATGTGCCGGCAAAATTCACCGGTGCATAATTCCGGTGAAGAAGAAATTACAGCTGATGAAAGTCTTTTGATTTATTGCAAACCTGTTGAATTCTACAATATTCTCTATCGTCGTTCTCTTCACAATCCTACTTTTCTTAAGAGATGTTTGCGCTATAAAATAAAAGCAAAGCAAAAAAGGAGGTTGCGAGCAGGAATTGTGGTTTTCAACTATAGGGACTGTTACAATGCGCTTCGAAAGACTGAAGTGACTGAAGACTTTTCTTGTCCATTTTGCTTGATGCAGTGTGCGAGCTTTAAGGGTTTGCGATTTCATCTTTGTGCATCACATGATCTATTCAACTTTGAGTTCTGGGTCACCAATGATTACCAAGCAGTGAACGTCTCTGTAAAAACTGACATATTGAGATCAGAGAATGTTGCTGATGGAGTAATTCCACAATCACAAACCTTCTTCTTCTGTTCAAGATCTCGAAAGCGTAGACCAAGAGGCTCCGTTCAAAATGGGAAGCATGCCAATGTAAATTTCCTGAAGTTGGATTCACCAGAAGGCATACAGAATGGGGTTCTACAGAAAGACAACGATATCCTGTCCAGCAAAGGGGAGAATATGTCAAGAGCATCTCGTAGTGAGAAGAATTTGCAGAATGAGGGAAATGGTGCTTCAATTGCCATGCCCCAATCTTCTGAGGACCCTGAATGTAGCAAATCAATATATAAAAGTGATCCTGCTCTGCCTACTAAAGCAAAGAAGTTAAATGCAGACCGTTCAGACTCAAAAAGTCGTATGCTCCTGCAGAAGAGGCAGTTCTTTCACTCACACAGAGTTCAGCCCATGGCACTGGAACAAGTGTTGTCAGACCGTGATAGTGAAGATGAAGTTGATGATGGAGTTGCTAACCTGGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAGCAGCTCATGCATCTCTGGAACTCTTTTATGAGAAAACAAAGGGTACTGGCTGATGGTCATGTTCCGTGGGCTTGTGAGGCATTTTCCAAGCATTATGCAAAAGAGCTGAATTCATCCCGAACTTTATTTTGGTGTTGGAGATTATTCATGGTCAAACTTTGGAATCATGGGCTTCTTGATGCATCAACAATGAACAACTGCAGTATAATATTGGAAAGCAACCAAAACGGGGGATCAGACAGTGGCACAAATTGA 1209 0.4119 MCRQNSPVHNSGEEEITADESLLIYCKPVEFYNILYRRSLHNPTFLKRCLRYKIKAKQKRRLRAGIVVFNYRDCYNALRKTEVTEDFSCPFCLMQCASFKGLRFHLCASHDLFNFEFWVTNDYQAVNVSVKTDILRSENVADGVIPQSQTFFFCSRSRKRRPRGSVQNGKHANVNFLKLDSPEGIQNGVLQKDNDILSSKGENMSRASRSEKNLQNEGNGASIAMPQSSEDPECSKSIYKSDPALPTKAKKLNADRSDSKSRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDGVANLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKHYAKELNSSRTLFWCWRLFMVKLWNHGLLDASTMNNCSIILESNQNGGSDSGTN* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0449 402 MobiDBLite consensus disorder prediction 195 234 - -
Mtr5g0449 402 MobiDBLite consensus disorder prediction 195 259 - -
Mtr5g0449 402 Pfam VEFS-Box of polycomb protein 252 387 IPR019135 -
Mtr5g0449 402 PANTHER POLYCOMB GROUP PROTEIN 61 399 - -
Mtr5g0449 402 PANTHER POLYCOMB GROUP PROTEIN 1 62 - -
Mtr5g0449 402 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 61 399 - -
Mtr5g0449 402 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0449 Mtr-Chr5 4140597 4149273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0449 1 68 C2H2 Transcription Factor Family AT5G51230 55.882 3.17e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0449 - - mtr:MTR_5g013150 812.372