Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0447 ATGTCACTTGTGCTGGTAAAATTTACATGCATAAATAAGCACATTTCACAAAATTCTAGCACCATCTATCATATTCATATCTCAAAAATGGTTTCTTCTTCTTCTACCTTATACATAATTTTCATTCTATTTCTTCAACTTTTGTTAGTCTTTGGAAACGTTACTCGAAGTTCTACACTATCTACCACAAACAAAAATTCATGGCTATCACCTTCTGGTGAATTTGCTTTCGGGTTTCAACAACTTGGTACAGCAACAAATCTCTTCATGCTTGCAATATGGTACAACAAGATACCTGAAAAAACCATTGTTTGGAGTGCTAAAAACACGAACAACAACAACCTCGTACAAGCACCGACAGGATCACAAGTTCAGCTAACATCAGGAGGACTCACGTTGACAACTCAACAAGGTGAATCCATTTGGACAGCACAACCAAACACAGCTGTTTCCTATGGAATCATGCATGATACTGGAAACTTTGTTCTTGTTAATAAGAATTCTTCTATTGTTTGGGAAAGTTTCAAGTTTCCCACCGACACCCTTTTGCCTAATCAATCTCTTGAATTAGGTGGAAACATAACTTCTAGATTTTCAGAGACCAACTACACAAGTGGGAGGTTCCAACTTTATTTTCGTGATGATGATCATAATCTCATGTTAAGTCCACTTGCATGGCCTACTCAATTACGTTACAAATTTTACTATAGAATTGATGTTAATAACTCTGCATCTTCAAGTTTAGTTTTTGATGAATCAGGAGATATTTATGTGGAAACAAATAAAAATGGTACTACTAGAATCATACCTCAGGGTACACAATGGAAAAATTTAGATCTTGATCCTAAGTTGTATTATTATAGAGCAACACTTGATTATTATGGAGTTTTGACACAATATTCTCATCCAAGGGACACTAAAGCAAAACAAGGATGGACTATTATGAGGTATGTTCCTGATAACATTTGCATTGCAATATTCAATGAAATGGGTAGTGGAACTTGTGGCTATAATAGCTATTGTTCCATGGAAAATCAGAGACCTACTTGTAAATGTCCTTATGGTTATTCGTTGATAGATCCAAGTAATCAATTTGGCGGGTGTCAACTCAATTTCACACTTGGTTGTGGAGATAATAATGGTGAAGGGTTGAATGTGAAGCCAGAAGAGTTATATGAGTTTACTGTTCTTAGAGATGTGGATTGGCCTTTATCAGATTATGAAAAGATGCAACCTTATTCTCAACAGGATTGTCAACAATCTTGTTTGCATGATTGCATGTGTGCTGTTGCAGTTTTCAATAACAATACTTGTTGGAAGAAAAGATTGCCTATTGCTAATGGAAGAGCACAAAGTGGTGGACAATTGGTACTTGTGAAAACAAGAGTTTCTCCTTTTGGTCCTTCTTCAACTACACACGATTTGAAGAAAGACGACCGGGTTAAGCCGATTCTTCAAGGTTTACTTATTAGTTCCACTGTCTTCAATAGCATACTCTTAGCTGCGGTTGTTTTTATGACTTTGTTGAAGCCGAAAAGGGTTGTCCAAGCTGCAACTCTGGTGGAAACAAATTTATGTTCATTTAGTTACGACGCATTAAAAGAAGCTACATGGGGTTTTAGTGAAGAACTAGGTAGAGGGTCCTTTGGTATTGTTTACAAAGGTGAGTTAAAAGCAGGATCAACTTGCAATGTTGTTGCTGTTAAGAGATTGGATCGGTTAGTGGAGGATCGCGAGAAGGAATTTAAGACTGAATTGAGAGCCATTGGAAAAACCTGCCACAAAAACTTGGTAAGGTTGGTTGGATTTTGTGATGAAGGATTGCATAGAATGTTAGTATATGAGTTCATGAGCAATGGTAGTCTTGCAAATATCTTGTTCGGAGAAACCAAACCCATTTGGAATCAAAGGGTTGGATTTGCTTTGGGGATCGCAAGAGGGTTGGTGTATTTACATGAAGAGTGTGACACTCCTATCATTCATTGCGACATAAAGCCTCAAAATATACTCATAGATGAGTATTTTACGGCAAAGATCTCTGACTTTGGTTTGGCCAAGTTGTTGTTGGCTGATCAAAGTAGAACAAATACAATGGTCCGAGGAACGCGGGGATATGTGGCTCCTGAATGGTTCAAGAATGTCCCTGTGACGGCTAAAGTGGATGTTTACAGCTTTGGTGCCATGTTGTTAGAAATTGTTTGCTGCAGAAAAAGTGTGGTGCTGATGGAGTCGGGGGAGGAAGAGAAGGCAATTTTGACAGATTGGGCTTGTGATTGTTATATGGAAGGGAGAATAGATGCTTTGGTGGAGAATGATCAAGAGGCCTTGGATGACATTGACAGGTTAGAAAAGTGGATAAAGATAGCAATTTGGTGCATTCAAGAACATCCTGAAATGAGGCCAACAATGAGGATGGTCATGCAAATGCTAGAAGATGTGGTTAAAGTCCCTGACCCACCATCACCATTTTCCTTCGGTTCAATTCCTTGA 2490 0.3819 MSLVLVKFTCINKHISQNSSTIYHIHISKMVSSSSTLYIIFILFLQLLLVFGNVTRSSTLSTTNKNSWLSPSGEFAFGFQQLGTATNLFMLAIWYNKIPEKTIVWSAKNTNNNNLVQAPTGSQVQLTSGGLTLTTQQGESIWTAQPNTAVSYGIMHDTGNFVLVNKNSSIVWESFKFPTDTLLPNQSLELGGNITSRFSETNYTSGRFQLYFRDDDHNLMLSPLAWPTQLRYKFYYRIDVNNSASSSLVFDESGDIYVETNKNGTTRIIPQGTQWKNLDLDPKLYYYRATLDYYGVLTQYSHPRDTKAKQGWTIMRYVPDNICIAIFNEMGSGTCGYNSYCSMENQRPTCKCPYGYSLIDPSNQFGGCQLNFTLGCGDNNGEGLNVKPEELYEFTVLRDVDWPLSDYEKMQPYSQQDCQQSCLHDCMCAVAVFNNNTCWKKRLPIANGRAQSGGQLVLVKTRVSPFGPSSTTHDLKKDDRVKPILQGLLISSTVFNSILLAAVVFMTLLKPKRVVQAATLVETNLCSFSYDALKEATWGFSEELGRGSFGIVYKGELKAGSTCNVVAVKRLDRLVEDREKEFKTELRAIGKTCHKNLVRLVGFCDEGLHRMLVYEFMSNGSLANILFGETKPIWNQRVGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEYFTAKISDFGLAKLLLADQSRTNTMVRGTRGYVAPEWFKNVPVTAKVDVYSFGAMLLEIVCCRKSVVLMESGEEEKAILTDWACDCYMEGRIDALVENDQEALDDIDRLEKWIKIAIWCIQEHPEMRPTMRMVMQMLEDVVKVPDPPSPFSFGSIP* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0447 829 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 39 827 - -
Mtr5g0447 829 Pfam D-mannose binding lectin 102 190 IPR001480 -
Mtr5g0447 829 ProSiteProfiles Protein kinase domain profile. 538 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0447 829 Gene3D - 177 309 IPR036426 -
Mtr5g0447 829 Pfam PAN-like domain 393 439 IPR003609 -
Mtr5g0447 829 SMART blect_4 59 178 IPR001480 -
Mtr5g0447 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Mtr5g0447 829 ProSiteProfiles Bulb-type lectin domain profile. 53 176 IPR001480 -
Mtr5g0447 829 Pfam Protein kinase domain 541 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0447 829 ProSitePatterns Protein kinases ATP-binding region signature. 544 569 IPR017441 GO:0005524
Mtr5g0447 829 SUPERFAMILY Protein kinase-like (PK-like) 524 811 IPR011009 -
Mtr5g0447 829 CDD STKc_IRAK 544 811 - -
Mtr5g0447 829 Gene3D - 54 176 IPR036426 -
Mtr5g0447 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 228 IPR036426 -
Mtr5g0447 829 SMART serkin_6 538 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0447 829 Gene3D Transferase(Phosphotransferase) domain 1 617 818 - -
Mtr5g0447 829 Gene3D Phosphorylase Kinase; domain 1 503 616 - -
Mtr5g0447 829 PIRSF SRK 24 828 IPR024171 GO:0004674
Mtr5g0447 829 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 39 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0447 Mtr-Chr5 4133781 4136643 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0447 524 815 Receptor kinase-like Gene Family AT5G45780 42.953 3.12e-68 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr5g0447 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0447 - - gmx:100775269 1075.08