LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr5g0445	ATGGCGTCTTCCTCTACCCTTTACATAATTGCCATTCTTTTTCTTCAACTTATATTAGCCTTTGGAAACGTTTCTCCAAGTTCAAGACTCTCCACCACTAACAACAACAACAATCCATGGCTATCACCTTCTGGTGAATTCGCTTTCGGATTTCGGAATACCACAACAAACTTTTTCATGCTTGCAATATGGTACAACAACATACATGATCAAACCATTGTTTGGAGCGCCAAAGACATGAACAACAGCAACAACCTCGTACTAGCACCAACAGGATCACAGGTTCAGCTAACATCAGGTGGACTCACGTTGACAAATCCACAAAATGAATCCATTTGGACAGCACAACCAAACGATATTGTTTCCTATGGAACCATGCTTGATAATGGAAACTTTGTTCTTGTAAACAACAAATCTGCTATTGTTTGGGAAAGTTTTAAGTTTCCTACTGATACCCTTTTGCCTAATCAATCACTTGAGTTAGGTGCCACCTTAACTTCAAGATTCTCAGAGACCAATTTCACAAGTGGAAGGTTCCAACTTTATTTTAATGATGATGATCATAATCTAATGTTAAGTCCACTTGCATGGCCTACTCAATTTCGTTACAATTTTTACTATAGAATTGAAGTTAATAATAACTCTGCATCTTCAAGTTTAGTTTTTGATGAATCAGGAGATATTTATGTGGAAACAAATAAAAATGGTACTACTAGAATCAAACCTCAGGGTACACAATGGAAAAATTTAGATCTTGATCCTAAGTTGTATTATTATAGAGCAATACTTGATTATTATGGAGTTTTGACACAATATTCTCATCCAAGGGACACTAAAGCAAAACAAGGATGGACGATTATGAGGTATGTTCCTGATAACATTTGCATTGCAATATTCAATGAAATGGGTAGTGGAACTTGTGGCTATAATAGCTATTGTTCCATGGAAAATCAGAGACCTACTTGTAAATGTCCTTATGGTTATTCGTTGATAGATCCAAGTAATCAATTTGGCGGGTGTCAACTCAATTTCACACTTGGTTGTGGAGCTGATAATGGTGAAGGATTGAATGTGAAGCCAGAAGATTTGTATGAGTTTACTGTTCTTACAAATGTGAATTGGCCATTATCAGATTATGAACGGATGCAGCCTTATTCTCAACATGACTGTCAACAATCTTGTTTGCATGATTGTATGTGTTCTGTTGTTGTCTTCAGTAACCAAAATTGCTGGAAGAAAAGATCGCCTCTAGCTAATGGAAGAGAAGAAAGTGGTGGTAATTTAGTACTTATAAAAACAAGAGTTTCTCCTCTTGGTAAAATAGGTGCTAGTCCTTCCACTAATTTGAAGAAAGACAACCAAGTTAACCCGATTCTTCGAGGTCTACTAATTGGTTCAGCTGTCTTCAATAGCATACTCTTGGCTGCAGTTGTTTTGGTGACTTTGTTGAAGCCGAAAAGGGTTGTCGTAGGCACAACTCTCTTGGAAACAAATTTATGTTCGTTTAGTTATGACGCGTTAAAAGAAGCTACATGGGGTTTTATTGAAGAACTAGGTAGAGGTTCCTTTGGAATTGTTTTCAAAGGTGAATTGAAAGCAGCAACGTCTTGTAATGTTGTTGCTGTTAAGAGATTGGATCGGTTAGCCCAAGATCGTGAGAAGGAATTTAAGACTGAGTTGAGAGCCATTGGTAAAACCTGCCACAAAAACTTGGTCAAGTTGATTGGATACTGTGATGAGGGAATGCATAGAATGTTGGTATATGAGTTCATGAACAATGGCAGCCTTGCAAACATCTTGTTTGGACAAACAAAACCCACTTGGAATCAAAGGATTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTATTTACATGAAGAGTGTGACACTCCCATCATTCATTGTGACATAAAGCCTCAAAATATACTCATAGATGAGTACTTCACAGCAAAGATTTCTGACTTCGGATTGGCTAAATTGTTGTTGGCCGATCAAAGTAGAACAAAAACCATGATCCGAGGAACGCGAGGATATGTAGCTCCTGAATGGTTCAAGAATGTTCCAGTGACGGCTAAAGTGGATGTTTACAGCTTTGGTGCCATGTTGTTGGAAATTGTTTGCTGCAGAAAAAGTGTGGTGCTGATGGAGTCAGGGGAGGAAGAAAAAGCAATTTTGACAGATTGGGCCTGTGATTGTTATATGGAAGGGAGAATAGATGCTTTGGTGGAGAATGATCAAGAGGCCTTGGATGACATTGACAGGTTAGAAAAGTGGATAAAGATAGCAATTTGGTGCATTCAAGAACATCCTGAAATGAGGCCAACAATGAGGATGGTCATGCAAATGCTAGAAGGTGTGGTTCAAGTCCCTAACCCACCATCGCCTTTTTCCTTCAGTTTGATTCCTTGA	2412	0.3852	MASSSTLYIIAILFLQLILAFGNVSPSSRLSTTNNNNNPWLSPSGEFAFGFRNTTTNFFMLAIWYNNIHDQTIVWSAKDMNNSNNLVLAPTGSQVQLTSGGLTLTNPQNESIWTAQPNDIVSYGTMLDNGNFVLVNNKSAIVWESFKFPTDTLLPNQSLELGATLTSRFSETNFTSGRFQLYFNDDDHNLMLSPLAWPTQFRYNFYYRIEVNNNSASSSLVFDESGDIYVETNKNGTTRIKPQGTQWKNLDLDPKLYYYRAILDYYGVLTQYSHPRDTKAKQGWTIMRYVPDNICIAIFNEMGSGTCGYNSYCSMENQRPTCKCPYGYSLIDPSNQFGGCQLNFTLGCGADNGEGLNVKPEDLYEFTVLTNVNWPLSDYERMQPYSQHDCQQSCLHDCMCSVVVFSNQNCWKKRSPLANGREESGGNLVLIKTRVSPLGKIGASPSTNLKKDNQVNPILRGLLIGSAVFNSILLAAVVLVTLLKPKRVVVGTTLLETNLCSFSYDALKEATWGFIEELGRGSFGIVFKGELKAATSCNVVAVKRLDRLAQDREKEFKTELRAIGKTCHKNLVKLIGYCDEGMHRMLVYEFMNNGSLANILFGQTKPTWNQRIGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEYFTAKISDFGLAKLLLADQSRTKTMIRGTRGYVAPEWFKNVPVTAKVDVYSFGAMLLEIVCCRKSVVLMESGEEEKAILTDWACDCYMEGRIDALVENDQEALDDIDRLEKWIKIAIWCIQEHPEMRPTMRMVMQMLEGVVQVPNPPSPFSFSLIP*	804

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr5g0445	803	SUPERFAMILY	Protein kinase-like (PK-like)	501	785	IPR011009	-
	Mtr5g0445	803	PIRSF	SRK	1	802	IPR024171	GO:0004674
	Mtr5g0445	803	Pfam	D-mannose binding lectin	72	162	IPR001480	-
	Mtr5g0445	803	SUPERFAMILY	alpha-D-mannose-specific plant lectins	59	199	IPR036426	-
	Mtr5g0445	803	SMART	blect_4	31	149	IPR001480	-
	Mtr5g0445	803	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	9	800	-	-
	Mtr5g0445	803	Gene3D	Phosphorylase Kinase; domain 1	479	590	-	-
	Mtr5g0445	803	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	633	645	IPR008271	GO:0004672\|GO:0006468
	Mtr5g0445	803	SMART	serkin_6	512	784	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr5g0445	803	ProSiteProfiles	Protein kinase domain profile.	512	788	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr5g0445	803	ProSitePatterns	Protein kinases ATP-binding region signature.	518	543	IPR017441	GO:0005524
	Mtr5g0445	803	ProSiteProfiles	Bulb-type lectin domain profile.	25	147	IPR001480	-
	Mtr5g0445	803	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	9	800	-	-
	Mtr5g0445	803	Pfam	PAN-like domain	365	413	IPR003609	-
	Mtr5g0445	803	Gene3D	-	29	147	IPR036426	-
	Mtr5g0445	803	Gene3D	Transferase(Phosphotransferase) domain 1	591	790	-	-
	Mtr5g0445	803	Gene3D	-	150	286	IPR036426	-
	Mtr5g0445	803	Pfam	Protein kinase domain	515	782	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr5g0445	Mtr-Chr5	4110831	4113432	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr5g0445	498	789	Receptor kinase-like Gene Family	AT5G45780	42.140	2.31e-66	229

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Mtr5g0445		Pkinase	1.9e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr5g0445	-		-	gmx:100775269	1030.01