Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0423 ATGGGGGTGGTGGAAGATGTGACATTAATTGGAGGGTTAATAGGAGTTCAATTTATCTATGCAGGAAATGCTGAGATAATGAGTTATTCAATGTCATTAGGAATTAGTCCTCTTACCATTGTCATTTTAACTTCCATTGCTACATTCCTTATTCTTTTACCTGCTGCATTTTGTTTTGAAAGGAGTAAGTGGCCTAAGAATTGGAGTTTAAAGTTTATTATGCAGATATGGTTTCTTTCATTTGGAGGATTAGCTTTTCAGTCTTTATTCCTGAAGGGAATCAATCTAACTTCACCAGCAATGGGAACTGCTATGCCAAACCTTGCCCCAGGTTTTATCTTCATCATCGCATGGACTTTTGGGTTAGAGAAAGTTAACTTGAGCAACAAGTATAGTACATTAAAAATCTTAGGAACATTGCTATGTGTATTAGGAGCTTTCACAATGAGCATAATGCAAAGCATTTCTGCTTCTGCAACCGAGAAAGAGGCTATACTTCCATCGTCATTAGCACCATCAGATTTTCTCTTCGACATGCAAAAGATTATCGGTTGCCTCTATCTAATGACTTCAGTTTTAATATTGTCAAGCAATGTTGTCCTGCAGGCTTTTGCTCTTGGAGATTTTCCTGCACCAATGTCATTAAGCGCGATAACGTCATTGTTTGGGGGATTTATGACTACAGCTGTTCAATTATTTGACAGAGACAATCTTAAAACTGGTTTGCAACTTGTGAGTTATGGAGATCTAATTGGCTTTTCCATTCTGGCTGGTTCAGTGAGTGGAATAAGCTTAAGCTTCAATGGGTGGGCACTAAAGAAAAGAGGACCAGTATTTGTCTCCATGTTTAGCCCAATTGGAACAATGTGCTCAGTTATTCTCTCTGTCTATACCATTGGAGAAACTATAAATATTGGAAGCATTGGTGGTATGTTCCTTATGTTCAGTGGACTCTACTTAGTTCTTTGGGCCAAAGGGAAAGAAGGATATGCAGATGTTGGAGATTTCTCAGAGAGTGAGTTTGATGCAAGCAAGCCTCTCTTATTATGTTAA 1053 0.3827 MGVVEDVTLIGGLIGVQFIYAGNAEIMSYSMSLGISPLTIVILTSIATFLILLPAAFCFERSKWPKNWSLKFIMQIWFLSFGGLAFQSLFLKGINLTSPAMGTAMPNLAPGFIFIIAWTFGLEKVNLSNKYSTLKILGTLLCVLGAFTMSIMQSISASATEKEAILPSSLAPSDFLFDMQKIIGCLYLMTSVLILSSNVVLQAFALGDFPAPMSLSAITSLFGGFMTTAVQLFDRDNLKTGLQLVSYGDLIGFSILAGSVSGISLSFNGWALKKRGPVFVSMFSPIGTMCSVILSVYTIGETINIGSIGGMFLMFSGLYLVLWAKGKEGYADVGDFSESEFDASKPLLLC* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0423 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 327 - -
Mtr5g0423 350 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020|GO:0016021
Mtr5g0423 350 Pfam EamA-like transporter family 16 150 IPR000620 GO:0016020|GO:0016021
Mtr5g0423 350 PANTHER WAT1-RELATED PROTEIN 9 340 - -
Mtr5g0423 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 150 - -
Mtr5g0423 350 PANTHER WAT1-RELATED PROTEIN 9 340 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0423 Mtr-Chr5 3860337 3862354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0423 3 339 Nodulin-like Gene Family AT5G47470 56.342 1.69e-132 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0423 - - aprc:113870214 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0423 5 3860337 3862354 Mtr4g3582 4 49555570 49559715 PCT