Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0419 ATGGATACACCTACTCTTTTACATTCTTTGCAATTGCTTTTGGTTTTCACTTGCATGTTGTTAAATGCAGGAATAGTAACACTTGCTGCACGCCTTCATCATCATCATCACCACACTACCTTCAACACATTGTCTACTACAAACTCTTCCAAGAACCACTGGATCGGACCCGTTGGTAACCGTGTTATCACGGTTGATATTAACGGTGGAGGTCAGTTCCAGTCCGTCCAAGACGCAGTAAATTCCGTCCCAGATAACAATACAATGAATGTCCTTATTCAAATCAGCGCTGGATTCTATAAAGAGAAAGTGGTAGTTCCCGTGACAAAACCGTACATAACATTTCAAGGGGAAGGGAGAGAAGTAACAGTGATTGAATGGCATGATAGAGCTTGTGATCCTGGTCCCAATGGACAACAGCTACGTACTTATAGAACTGCTTCTGTTACTGTCTTTGCCAACTATTTCTCTGCAAAGAATATCACCTTCAAGAATACAGCGCCGGCACCAATGCCCGGGATGCAAGGATTGCAAGCGGTGGCGTTTCGCATATCAGGGGACAAAGCATACTTCTCCGGATGTGGCTTCCATGGTGCACAAGACACACTTTGCGACGATGCTGGTAGGCATTACTTCAAGGAATGCTACATTGAGGGCTCCATTGATTTCATTTTTGGAAATGGAAGATCCATGTACAAGGATTGTGAGCTGCATTCAATAGCAACAAGGTTCGGATCCATAGCAGCACAGGATAGACAATACCTAGACGAGAAGACAGGCTTCACATTTGTACGATGCAAGGTGACAGGTTCAGGCCCACTATATGTAGGACGTGCAATGGGGCAATACTCAAGAATAGTTTATGCCTATACATACTTTGATGATATAGTTGCACACGGTGGTTGGGATGATTGGGACCACACCAACAACAAAAACAAGACTGTGTTCTTTGGAGTGTACAAATGTTGGGGACCGGGAGCAGAGGCAGTACGTGGGGTGTCATGGGCACGAGAGTTGGATTTCGAAACAGCACATCCATTTATCAGGAAGAGCTTCGTCAATGGGAGACATTGGATCGCACCTACTGATGCTTAG 1095 0.4493 MDTPTLLHSLQLLLVFTCMLLNAGIVTLAARLHHHHHHTTFNTLSTTNSSKNHWIGPVGNRVITVDINGGGQFQSVQDAVNSVPDNNTMNVLIQISAGFYKEKVVVPVTKPYITFQGEGREVTVIEWHDRACDPGPNGQQLRTYRTASVTVFANYFSAKNITFKNTAPAPMPGMQGLQAVAFRISGDKAYFSGCGFHGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRQYLDEKTGFTFVRCKVTGSGPLYVGRAMGQYSRIVYAYTYFDDIVAHGGWDDWDHTNNKNKTVFFGVYKCWGPGAEAVRGVSWARELDFETAHPFIRKSFVNGRHWIAPTDA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0419 364 Gene3D - 59 364 IPR012334 -
Mtr5g0419 364 Pfam Pectinesterase 63 355 IPR000070 GO:0030599|GO:0042545
Mtr5g0419 364 ProSitePatterns Pectinesterase signature 2. 217 226 IPR033131 -
Mtr5g0419 364 PANTHER PECTINESTERASE 68-RELATED 25 363 - -
Mtr5g0419 364 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 363 - -
Mtr5g0419 364 SUPERFAMILY Pectin lyase-like 59 362 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0419 Mtr-Chr5 3831822 3834602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0419 9 364 Carbohydrate Esterase AT5G47500 70.718 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0419 - - cam:101501763 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0419 5 3831822 3834602 Mtr5g0419 5 3831822 3834602 ECH