Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0402 ATGGCTGGTGGGTGGGTGAAATCATTGCAATGCAAATCCAAAGCATTTGAAGATGTTTACAACCCAAACACAAACACAAAAAACAGAATACAAAGTGCAAGTTGTAGAAAAAGTGTTCAAGATATTAAAGATGTTGTAGTTGAAACAACAAAACCTAAATCCAAAAAACCGCTTCAAAAACATCATAGTTCAAGATATCCAACAGCAACAACCGATTTTGAAACTACCATAAACCGTTCTAGAAGCACAAACTCAACTACCCACCGGAATAATATTCCGATGCCGGTGCCATCACCGGACCCACGTTTCTCTTCTTTAACGGAGCTTAATGAAGGTCATCCTTCAAGAAATGTGGTGGAGATAATTTTTCACACTAGCTGGGGACCCAAACCGTTTTCGGGTCGGGTTGAAATGATTTTCAAGGTTCACAATGGTTCAAGAACGGTGACTCGGTTTGAAGAGTATCGCGAAACGGTGAAAACCCGACCCGGGTCGAGGAACCATGAAGAGAATGCTAGGTGTGTTGCTGATGGGAATGAAGTAATGAGGTTTCATTGTTTGGGACCCACTTCCGGTGGTGGTCCCTACGGTGGAGCTTGTGTGGGGTCGTTTCCAGGTGGGAAAGGTACAGCAGCGATCTGCACGTTTTCCGGCAGCGGTGGAGCACATGAGAGTTCTGGTGGTGGTAGAGGAAGAAGGGCTATGTTGGTTTGTCGGGTCATAGCGGGTAGGGTTTCCAAGCGGGTAGGGTTTGTGGATTCGTTGTTGGATGGACGAGTTGGGTTTGACTCGGTGAGTGGTGATAATGGTGAGTTGTTGGTCTTTGACTCGCGTGCTGTTTTGCCTTGTTTTCTTATCATTTATAGGTTGTAA 873 0.4525 MAGGWVKSLQCKSKAFEDVYNPNTNTKNRIQSASCRKSVQDIKDVVVETTKPKSKKPLQKHHSSRYPTATTDFETTINRSRSTNSTTHRNNIPMPVPSPDPRFSSLTELNEGHPSRNVVEIIFHTSWGPKPFSGRVEMIFKVHNGSRTVTRFEEYRETVKTRPGSRNHEENARCVADGNEVMRFHCLGPTSGGGPYGGACVGSFPGGKGTAAICTFSGSGGAHESSGGGRGRRAMLVCRVIAGRVSKRVGFVDSLLDGRVGFDSVSGDNGELLVFDSRAVLPCFLIIYRL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0402 290 PANTHER SULFATED SURFACE-LIKE GLYCOPROTEIN 2 289 - -
Mtr5g0402 290 SUPERFAMILY ADP-ribosylation 105 289 - -
Mtr5g0402 290 Gene3D - 104 289 - -
Mtr5g0402 290 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 289 - -
Mtr5g0402 290 MobiDBLite consensus disorder prediction 63 93 - -
Mtr5g0402 290 MobiDBLite consensus disorder prediction 48 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0402 Mtr-Chr5 3642963 3644330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0402 62 289 C2H2 Transcription Factor Family AT5G54630 34.340 1.08e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0402 - - gmx:100804686 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0402 5 3642963 3644330 Mtr5g0402 5 3642963 3644330 ECH