Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0401 ATGTCGGCTTACACTAACCATAACCAGGATCCTCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCTGATTTCCCTAAAGCTGGTATTATGTTCCAAGACATAACAACTTTGTTGCTGGATCCCAAAGCTTTTAAGGACACGATTGATTTGTTTGTTGAACGTTACAAGGGCAAAAATATTTCTGTTGTTGCAGGAATCGAAGCTCGTGGTTTCATTTTTGGTCCTCCCATTGCCCTAGCAATAGGAGCAAAGTTTGTACCCTTGAGGAAACCGAAGAAGTTGCCTGGCAAAGTTATATCTCAAGAATATATTCTGGAATATGGAAGGGATTGTCTTGAGATGCATGTTGGAGCTGTTGAAACTGGTGAACGTGCTATTGTGGTTGATGATTTGATTGCAACTGGTGGAACGCTCGGTGCAGCAATGAATTTACTTGAACGTGTTGGAGCAGAGGTAGTGGAGTGTGCATGTGTAATTGAATTACCGGAACTGAAGGGTCGTGAACGTTTGAATGGGAAGCCGTTGTACGTGTTGGTGGAATACTTTGATATATGA 561 0.4242 MSAYTNHNQDPRLHGIKTKIRVVPDFPKAGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVETGERAIVVDDLIATGGTLGAAMNLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVEYFDI* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0401 186 CDD PRTases_typeI 50 182 IPR000836 -
Mtr5g0401 186 Hamap Adenine phosphoribosyltransferase [apt]. 16 183 IPR005764 GO:0003999|GO:0005737|GO:0006168
Mtr5g0401 186 TIGRFAM apt: adenine phosphoribosyltransferase 16 183 IPR005764 GO:0003999|GO:0005737|GO:0006168
Mtr5g0401 186 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 8 182 - -
Mtr5g0401 186 Pfam Phosphoribosyl transferase domain 52 169 IPR000836 -
Mtr5g0401 186 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 8 182 - -
Mtr5g0401 186 SUPERFAMILY PRTase-like 14 177 IPR029057 -
Mtr5g0401 186 Gene3D - 3 183 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0401 Mtr-Chr5 3634601 3639099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0401 5 182 PRT Gene Family AT1G27450 76.966 1.89e-98 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0401 K00759 - gmx:100306411 338.961