Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0390 ATGCGAGAGGACCATATGATACAGTCATATATAGATACATATATCACTATATTGCTAGTAAACATGGCGGCTAGAGCCGGGGTTTATTTGCTGGTCTTCATGAGTCTTGTCACTGCAGAATCCTCTATAACCCCGTCAGAGTTCATCAGGTCCTCATGCAGAGCTACTCGCTATCCTGTTTTATGTGTTCAATGTCTCATGGGGTATGCGAGTGTGATTGGCCAAAGCGAGCGACAACTAACGATAACTGCTCTATCAGTGAGCATATCTAGGACACGATCGAGTGCATCGTTTGTAAAGAAGATATCAAAAGCAAGAGGCATCAAGCCAAGGGAGTACAGAGCCGTACAAGACTGCATAGAAAACATGGGTGACAGTTTGGACAGTCTTAGCCAATCGGTTAGGGAGTTAGGCAGTATTGGTCATGCTGTTGGAGAGGACTTTGTGTGGCACATGACCAACGTGCAGACTTGGGTCAGTGCTGCACTTACTGATGATAACACTTGTCTTGATGGCTTTGCTGGTCCTTCCATGAATGGAATTGTTAAGGCTGCCATCAAGGACAGGGTTGTCAATGTTGCTCAAGTTACCAGCAACACACTCGCTTTGGTTAATCGCTTTGCCTCAAGCCATCGAACTGCAGAAACTCCTTAA 654 0.4557 MREDHMIQSYIDTYITILLVNMAARAGVYLLVFMSLVTAESSITPSEFIRSSCRATRYPVLCVQCLMGYASVIGQSERQLTITALSVSISRTRSSASFVKKISKARGIKPREYRAVQDCIENMGDSLDSLSQSVRELGSIGHAVGEDFVWHMTNVQTWVSAALTDDNTCLDGFAGPSMNGIVKAAIKDRVVNVAQVTSNTLALVNRFASSHRTAETP* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0390 217 SMART PMEI_2 44 203 IPR006501 GO:0004857
Mtr5g0390 217 PANTHER PECTINESTERASE INHIBITOR-LIKE 32 211 - -
Mtr5g0390 217 TIGRFAM PME_inhib: pectinesterase inhibitor domain 28 205 IPR006501 GO:0004857
Mtr5g0390 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 207 IPR035513 -
Mtr5g0390 217 Pfam Plant invertase/pectin methylesterase inhibitor 48 203 IPR006501 GO:0004857
Mtr5g0390 217 CDD PMEI-like_3 51 209 - -
Mtr5g0390 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 207 IPR035513 -
Mtr5g0390 217 PANTHER PECTINESTERASE INHIBITOR 9 32 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0390 Mtr-Chr5 3561495 3562442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0390 35 204 Carbohydrate Esterase AT3G14310 30.058 6.66e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0390 - - mtr:MTR_5g012000 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0390 5 3561495 3562442 Mtr5g0390 5 3561495 3562442 ECH