Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0382 ATGACTATTCAAGAGAAACTTGAAGTAAATGATGTCACCTCTGATGTTAGTAAGGAGAAACTTGTCGCTATGAAATATATCGAAGAATTAAACAAGTTTTATAAGAAGGATGAGGGGAGTACGAGTACCGGTGATTACGCGGTCTCACAATCTAATATCTATATTAGCAGGAGACCTAAGCTTCTTGACAGGGTTATAGGTATCCATACCAAGTATGCAATTTCACAGGAATCCCTTTTTCTAGCTATGAATATTGTTGATCGATTCTTGGTAGCCAGATCGGTGAGAGAGGAAAAACTTCGGTTGGTTGGCATGGGCGCCTGGCTGATAGCATATAAGTATGGTGGAATCTGGCACCTTAAGGTGGATACCTTTGTTACTCTTCCTGATAATCCTTACACACGTGCACAAATACTATGGATTGAGGAAGAGACATCAGGAGCTTTAAACCGGAAACTGACTGTTTCAACACCCTTTCATTTTCTATCTCTTTTCTTTAAGGCACCACCAGATGACACATATAACAACTTTCTTTTGGAAAACATGACTTATTTCCTATCTGAATTGGGAATGATCAATTTTACACCTTGA 591 0.3892 MTIQEKLEVNDVTSDVSKEKLVAMKYIEELNKFYKKDEGSTSTGDYAVSQSNIYISRRPKLLDRVIGIHTKYAISQESLFLAMNIVDRFLVARSVREEKLRLVGMGAWLIAYKYGGIWHLKVDTFVTLPDNPYTRAQILWIEEETSGALNRKLTVSTPFHFLSLFFKAPPDDTYNNFLLENMTYFLSELGMINFTP* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0382 196 Pfam Cyclin, N-terminal domain 33 151 IPR006671 -
Mtr5g0382 196 PIRSF Cyclin_A_B_D_E 1 196 IPR039361 -
Mtr5g0382 196 Gene3D - 34 189 - -
Mtr5g0382 196 SUPERFAMILY Cyclin-like 26 150 IPR036915 -
Mtr5g0382 196 CDD CYCLIN 58 139 IPR013763 -
Mtr5g0382 196 PANTHER CYCLIN-B1-4 9 194 - -
Mtr5g0382 196 Gene3D - 43 154 - -
Mtr5g0382 196 PANTHER CYCLINS 9 194 IPR039361 -
Mtr5g0382 196 SMART cyclin_7 63 147 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0382 Mtr-Chr5 3518247 3520228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0382 9 194 Core Cell Cycle Gene Families AT2G26760 36.364 1.03e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0382 K21777 - jre:109019752 144.821