Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0379 ATGAACTCCTTCCATCTCCTCTTTTCTATGTTTTTTTTCATTGCCTTTTCAATTTCACAAACTGTTCTTGGAAATGCAGAGCTAAGAGCTTTGATGGATTTGAAAGCCTCTCTTGATCCAGAGGGAAAGATTCTTACCTCATGGATCGGTGATGGTAATCCATGCAGTGGTTCATTTGAAGGGATTGCTTGCAATGAACATTGGAAAGTGGCTAATATCTCTTTGCAGGGAAAGGGACTTTTTGGATCATTATCTTCATCTGTAGCTGAACTCAAATGCTTGTCAGGGTTATACTTGCATTATAACAATCTTTCTGGTGAGATACCATCACAGATTTCAAATCTTACTGAACTTGTTGATCTCTATCTTGATGTTAATAGTCTTTCTGGAAGAATTCCTCCTGAGATTGGCAACATGGCTAGTCTCCAAGTACTTCAGTTGGGAGATAATCAATTGGTAGGGAATATACCTACACAGATGGGTTCCTTAAAGCAACTTACAACTCTTGCTTTGCAATATAACAAGTTAACTGGTCAAATTCCTCTTAGCTTAGGGAACTTGGAAAATCTAAGCAGGCTAAATTTGAGCTTCAACAATTTCAGTGGTGCTATTCCAGCAACTCTAGCCAATATTGCACATTTGGAAGTTCTAGACATCCAAAACAATTCTTTGTCGGGAACTGTTCCTTCTGTGTTGCAGAGACTTGGGGAAGGATTCCAAGGGGCAAACAACCAAGGTTTATGTGGAGTAGGGATTTCTACTTTGAGAGCTTGCAACAAAGAACCAGATTTAAACGTCAGCAACATTGATACCTCGGATCAAGACCACCTCAAAAATAGTAATCCTGCAACGCCTCGCCCGGAGCCTGCGAATTTCCAAATGCATTGTAACCAGAAACATTGCTCAAAATCAAGAAGTGTTCCTACAAGTGTCATCACAGCGAGTGTTATAGCCATCATCACACTCACAATCATAGGTGCTGGATTATTTACATTCGTCAAATACCGCCGTCGAAAGCAGAAAATTTCATCCAACTCTTCTGAAGGGAAACTTAGTCCTCAGCAACCTAAAGAGTTATACCAAAAAAGTCCATCTACACTTGTTAATCTTGACTATTATAATGGATGTTATCCAATGCCTGATGATCAAAATGCCGGTGGATTATCAAATGAATATCTAAACCAGTTTAGGTTTAATGTAGATGAAGTCGAATCTGCAACACAGTATTTTTCAGAAGTGAATTTATTGCGTAAGAGCAAATTCTCGGCAACGTATAAGGGAGTTCTCAGAGATGGTTCTCTTGTGGCTATTACAAGCATTAACATGTCATGCTGCAAAACTGAGGAAGCCGAATTTGTAAAGGGATTGAGCTTATTAACCTCACTTAGACATGAAAACGTTGTCAAGCTAAGAGGTTTCTGTTGCTCAAGTAGTAGAGGTGAATGTTACCTTATCAACGACTTTGCTATGATGGGTGACCTGTCCCAATATCTTGACATAGAAGATAGAAGTGGCCATTTGCTTGACTGGTCCAAGAGGGTTACTATCATCAAGGGCATTGCAAAGGGTATAGGATATCTGCACAGCAATGAAGCAAGCAAACCTACGATAGTACACCAGAATATTTCAGTGGAGAATGTTCTCCTTGACAAAGATTTTAATCCTTTGATCATGAATGCGGGACTTCCCAAGCTTCTTGCAGACGATGTAGTTTTCTCGGCTCTAAAAGTAAGTGCTGCAATGGGATACCTAGCTCCCGAATACATTACTACGGGACGCTTTACCGAGAAGAGCGACATATACGCATTTGGAGTTATTGTACTTCAAGTTTTATCTGGCAAGACAGCGATAGGCGGTTCAATCCGGACGGCATTTCAATCTTTCAAATTTGATGATTGCATCGACACAAATCTTAAGGGAAGATATTCTAATTCTGAAGCAAGCATTCTTACAAAGCTTGGAATGCAATGTATCCATGAGAGCCCCGATGAAAGACCAAACATGGTGGATGTGATTCAGGAGCTAAGTGTGTTTCCGGCTCATTCATTATGA 2052 0.4011 MNSFHLLFSMFFFIAFSISQTVLGNAELRALMDLKASLDPEGKILTSWIGDGNPCSGSFEGIACNEHWKVANISLQGKGLFGSLSSSVAELKCLSGLYLHYNNLSGEIPSQISNLTELVDLYLDVNSLSGRIPPEIGNMASLQVLQLGDNQLVGNIPTQMGSLKQLTTLALQYNKLTGQIPLSLGNLENLSRLNLSFNNFSGAIPATLANIAHLEVLDIQNNSLSGTVPSVLQRLGEGFQGANNQGLCGVGISTLRACNKEPDLNVSNIDTSDQDHLKNSNPATPRPEPANFQMHCNQKHCSKSRSVPTSVITASVIAIITLTIIGAGLFTFVKYRRRKQKISSNSSEGKLSPQQPKELYQKSPSTLVNLDYYNGCYPMPDDQNAGGLSNEYLNQFRFNVDEVESATQYFSEVNLLRKSKFSATYKGVLRDGSLVAITSINMSCCKTEEAEFVKGLSLLTSLRHENVVKLRGFCCSSSRGECYLINDFAMMGDLSQYLDIEDRSGHLLDWSKRVTIIKGIAKGIGYLHSNEASKPTIVHQNISVENVLLDKDFNPLIMNAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKTAIGGSIRTAFQSFKFDDCIDTNLKGRYSNSEASILTKLGMQCIHESPDERPNMVDVIQELSVFPAHSL* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0379 683 Pfam Protein tyrosine and serine/threonine kinase 417 675 IPR001245 GO:0004672|GO:0006468
Mtr5g0379 683 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Mtr5g0379 683 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Mtr5g0379 683 Gene3D Phosphorylase Kinase; domain 1 382 488 - -
Mtr5g0379 683 MobiDBLite consensus disorder prediction 266 287 - -
Mtr5g0379 683 ProSiteProfiles Protein kinase domain profile. 410 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0379 683 SUPERFAMILY Protein kinase-like (PK-like) 387 676 IPR011009 -
Mtr5g0379 683 Gene3D Ribonuclease Inhibitor 24 179 IPR032675 -
Mtr5g0379 683 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 677 - -
Mtr5g0379 683 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 677 - -
Mtr5g0379 683 SUPERFAMILY L domain-like 28 234 - -
Mtr5g0379 683 Gene3D Transferase(Phosphotransferase) domain 1 490 678 - -
Mtr5g0379 683 Gene3D Ribonuclease Inhibitor 180 245 IPR032675 -
Mtr5g0379 683 MobiDBLite consensus disorder prediction 266 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0379 Mtr-Chr5 3485106 3488770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0379 14 523 Miscellaneous Gene Families AT4G22730 56.926 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Mtr5g0379 PK_Tyr_Ser-Thr 2.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0379 - - mtr:MTR_5g011840 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0379 5 3485106 3488770 Mtr5g0379 5 3485106 3488770 ECH