Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0371 ATGTTAGAAGTATGTGACAACAATAGTGGTTGTAAAAGAATGGGTAACTTTAAGGTGTCTCTGGTGGGTCCTGATTTACGCCCTTTGGGAGGTGTGGTGGCTAATAAGCTTATTGCAGCATCTTCAGTAAAGGTCACTGTGGGTAGTTTTACTTTGGATGTTAAGAAGGCTAGCTCGAATAACTTGAAAATTGGGCCTTCTTCAGTGCCATCGTCCCAAATTGCTGCTTCTGGGACTCCAATCGGTGCTACCCTTCAAGGGCCTTCATATGAGTCCTCTGGTGACAATCAGAATAGTCCTTTTAGTCAGAGGCTTGGAAGCTACAATAATGCTAGTCAACCTTTTCCTACTACGGCGATGTACCAGAAATCATTGGCTCGCCAAATTCAGTAG 393 0.4402 MLEVCDNNSGCKRMGNFKVSLVGPDLRPLGGVVANKLIAASSVKVTVGSFTLDVKKASSNNLKIGPSSVPSSQIAASGTPIGATLQGPSYESSGDNQNSPFSQRLGSYNNASQPFPTTAMYQKSLARQIQ* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0371 130 MobiDBLite consensus disorder prediction 66 119 - -
Mtr5g0371 130 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 2 129 IPR039605 GO:0003680
Mtr5g0371 130 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 2 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0371 Mtr-Chr5 3426666 3427356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0371 2 110 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 38.261 1.27e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0371 - K14306 mtr:MTR_1g038990 139.813