Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0369 ATGAAGATAATGTCATTTTGTCAGCAAGGACCAGAAGCTATATGCATTCTATATGTAAATGGAGTCATATCAAAAGTCGTCATTAGTCGACCTCAATCGTCTCGAACATTATTCACATATGAGGTGAAGCTTCACGGTAGATATGAAATTCGAACTTTATCTGGCTCATTCATGCCAAAGGAAAAGTGCGGAAGGCGAAGTATATCTGGTGGCATGAGTGTTTCTTTGGTGGATCTACATGGACATGTTGTTGGCGGTCGCGTAGCTGGTCCATTGGTGGCTGCAAGTCCTGTAAATGTAGTGGTAGGCAGTTTTCTGCCAAGTGAACATGAGCAGAAGCTAAAAACACAGAATAATGAGGTAATTTCAACTCCAGCTGCTCCCATGTCTACTGCTGGTCCAAATACCTAA 411 0.4234 MKIMSFCQQGPEAICILYVNGVISKVVISRPQSSRTLFTYEVKLHGRYEIRTLSGSFMPKEKCGRRSISGGMSVSLVDLHGHVVGGRVAGPLVAASPVNVVVGSFLPSEHEQKLKTQNNEVISTPAAPMSTAGPNT* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0369 136 MobiDBLite consensus disorder prediction 117 136 - -
Mtr5g0369 136 MobiDBLite consensus disorder prediction 113 136 - -
Mtr5g0369 136 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 105 IPR005175 -
Mtr5g0369 136 CDD DUF296 2 105 IPR005175 -
Mtr5g0369 136 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 1 127 - -
Mtr5g0369 136 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 127 IPR039605 GO:0003680
Mtr5g0369 136 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 117 - -
Mtr5g0369 136 Gene3D - 1 123 - -
Mtr5g0369 136 ProSiteProfiles PPC domain profile profile. 1 126 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0369 Mtr-Chr5 3419611 3420654 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0369 1 132 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 54.745 1.43e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0369 - - mtr:MTR_5g011680 272.322