Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0367 ATGGAGCTAGATGTTGGCTTTGACCAATTGCTTGCAAGCTCAGTTGGTGCTATAATAAATTTGGATCCTGATGAGGACACTATTGTTCTTCCTAAGAAATTGATTCATGAAGATCAAACTCAACACCCTCAAGAAGTAGAGCATCAGGTGTCGAATGCCACTGCTTTTACACCTCATATCAGTATTATCACGGTTAAAGCTGGAGAGAATGTTACTATGAAGGTAATGTCATCGTGTCGGAAAGAACCAGAAGCTATATGCATTCTATCTGCAATTGGAGTCATATCAAGCGCAACCATTAGTCAGCCTCACTCGTCTGAAAAATTATCCACATATGAGGGTAAATATTGTATTGTATCTTTATCTGGCCCATTCATGCCAAACGAAAGTCGCGGTGGTGGCATGAGTATTTCTTTAATGGGTCTAGATGGACATGTTGTTGAAGGTTGCGTAGCTGGTCCATTGATGGCTGAAAGTCCAGTAAAAGTAAGTACCTGGGAAGGGAATAATATGTTTTTCACATATTAA 528 0.3996 MELDVGFDQLLASSVGAIINLDPDEDTIVLPKKLIHEDQTQHPQEVEHQVSNATAFTPHISIITVKAGENVTMKVMSSCRKEPEAICILSAIGVISSATISQPHSSEKLSTYEGKYCIVSLSGPFMPNESRGGGMSISLMGLDGHVVEGCVAGPLMAESPVKVSTWEGNNMFFTY* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0367 175 Gene3D - 59 173 - -
Mtr5g0367 175 ProSiteProfiles PPC domain profile profile. 53 175 IPR005175 -
Mtr5g0367 175 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 44 163 - -
Mtr5g0367 175 Pfam Plants and Prokaryotes Conserved (PCC) domain 62 163 IPR005175 -
Mtr5g0367 175 SUPERFAMILY AF0104/ALDC/Ptd012-like 61 170 - -
Mtr5g0367 175 CDD DUF296 62 155 IPR005175 -
Mtr5g0367 175 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 44 163 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0367 Mtr-Chr5 3389226 3390142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0367 56 163 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.522 1.47e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0367 - - mtr:MTR_5g011610 324.324