Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0355 ATGAGCATGAGAACACACTGTCAAATTCATCTTTTTCATGCTCTATTCTGCTTCATTCTCTGTTTGTTTTGGTCTATTGCAACGGTTTCACCAGCTACTGAGAAAGAGATTTTACTTCAGTTCAAGGGTAACATCACAGAGGATCCATATAGCACTTTGAGTTCATGGGTTTCTGGTGGAGACCCATGTCAAGGTTACACAGGTGTCTTCTGTAACATAGAAGGTTTTGTAGAAAGAATTGTGCTTTGGAACACTAGCTTGGTGGGTGTGTTGTCACCAGCACTCTCAGGGTTGAAGAGGTTGAGGATATTGACATTGTTTGGGAATCGATTTTCGGGTAATATTCCAGATGATTATGCTGATCTTCACTCATTGTGGAAGATTAATTTCAGCTCCAATGCGTTATCCGGTTCGATCCCAGATTTCATGGGTGATTTGCCTAATATTCGTTTTCTAGATTTATCAAAGAATGGCTTCAATGGGGAGATACCTTCAGCTTTGTTTAGGTACTGCTATAAAACTAAGTTTGTTTCTCTTTCTCATAACAATCTTGTAGGTTCAATTCCTGTGTCTTTGGTGAATTGCTCTAACCTTGAAGGTTTTGATTTTTCTTTCAATAATCTTAGCGGTGTTGTCCCTTCTAGACTATGTGACATTCCTATGTTATCTTATGTATCACTTAGAAGCAATGCCTTATCAGGTAGTGTGGAAGAGCACATTTCTGGATGCCATAGTCTAATGCATTTGGATTTTGGTAGTAATAGATTTACTGATTTCGCTCCATTCAGCATCCTAGGACTGCAAAATCTTACATATTTCAATATATCCTATAATGGGTTTGAAGGACAAATTCCTGATATCACTGCATGTAGTGAGAGATTAGTGGTCTTTGATGCTTCAGGGAATAATTTGGATGGGGTTATTCCCCCTAGCATAACTAGATGCAAGAACTTAAAGCTCTTGTCGTTAGAGTTGAATAAGCTGAAAGGGAGTATCCCAGTTGATATTCAAGAATTGCGAGGACTATTGGTTATCAAATTAGGTAATAACTCGATAGGTGGAATGATTCCTGAGGGGTTTGGCAACATTGAACTGCTTGAATTGCTGGATTTGAACAACCTAAACCTCATCGGTGAAATTCCGGCTGATATAACAAATTGCAAGTTTCTTCTTGAGCTGGATGTCTCCGGTAATAACTTAGACGGTGAGATTCCTCTGTCCGTTTACAAAATGACAAATCTTGAAGCCCTTGACATGCATCATAACCAGCTCAAGGGAAGCATCCCTTCAAGCCTAGGAAACCTATCAAGGATCCAATTCCTAGATCTATCACATAATTCATTTTCTGGTTCAATCCCTCCTTCACTTGGAGATTTAAATAACTTGACACATTTTGATCTCTCATTCAACAATCTCTCTGGTGTCATTCCTGATATTGCAACAATACAGCATTTCGGTGCACCTGCATTTTCCAATAATCCTTTTCTCTGCGGTGCCCCTTTAGACATCACTTGCTCCGCAAACGGAACAAGATCATCATCTTCACCTCCTGGGAAGACTAAACTTCTCAGTGTGTCTGCTATTGTTGCCATTGTTGCTGCAGCTGTGATTCTAACTGGGGTTTGTTTGGTGACCATCATGAGTATTAGGGCCCGACGTAGAAAAAAAGACGATGATCAAATTATGATTGTTGAGAGTACACCTCTAGGATCAACAGAATCATCAAATGTTATAATTGGAAAGTTGGTTCTCTTCAGCAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCAGGCACCAAAGCATTGCTTGACAAGGAGTCATTGATAGGAGGCGGATCAATTGGTACAGTCTACAAAACCGATTTTGAAGGTGGCATCTCAATCGCAGTGAAGAAGCTTGAGACTTTGGGAAGGATCAGAAATCAAGAGGAATTCGAAAACGAAATTGGGCGACTAGGAAACCTTCAACACTGTAATTTAGTTGTATTTCAAGGTTACTACTGGTCCTCTTCAATGCAGTTGATTTTGTCAGAGTTTGTTTCAAATGGAAATCTCTATGATAATCTACATGGGTTTGGATATCCTGGAACCAGCACAAGTAGAGGCAATAGGGAATTATATTGGTCTAGAAGGTTCCAAATTGCACTTGGAACTGCAAGAGCCCTAGCCTCTCTCCACCATGACTGTCGCCCTCCAATCCTTCACCTCAACCTTAAATCCTCTAACATACTCTTAGATGACAAATATGAAGCCAAGTTATCTGATTATGGATTAGGAAAGTTGCTACCTATTTTGGATAATTTCGGTCTCACCAAGTTCCACAATGCTGTTGGATATGTTGCACCAGAGTTGGCTCAAAGCTTTAGGCAGAGTGAGAAGTGTGATGTTTACAGTTTCGGTGTCATTCTTTTGGAGCTAGTTACAGGGAGGAAGCCTGTGGAAAGTGTAACCGCACATGAGGTTGTTGTTTTGTGTGAATATGTAAGAAGTTTGTTGGAAACGGGCTCAGCTTCAAACTGCTTTGACAGGAATTTACAAGGATTTGTTGAGAATGAATTGATTCAGGTTATGAAATTGGGGCTAATTTGTACTTCAGAGGATCCTTTAAGAAGACCAAGCATGGCTGAGATTGTTCAGGTCCTTGAGTCCATCAGAGATGGATCAGAATCTCATTAA 2679 0.4001 MSMRTHCQIHLFHALFCFILCLFWSIATVSPATEKEILLQFKGNITEDPYSTLSSWVSGGDPCQGYTGVFCNIEGFVERIVLWNTSLVGVLSPALSGLKRLRILTLFGNRFSGNIPDDYADLHSLWKINFSSNALSGSIPDFMGDLPNIRFLDLSKNGFNGEIPSALFRYCYKTKFVSLSHNNLVGSIPVSLVNCSNLEGFDFSFNNLSGVVPSRLCDIPMLSYVSLRSNALSGSVEEHISGCHSLMHLDFGSNRFTDFAPFSILGLQNLTYFNISYNGFEGQIPDITACSERLVVFDASGNNLDGVIPPSITRCKNLKLLSLELNKLKGSIPVDIQELRGLLVIKLGNNSIGGMIPEGFGNIELLELLDLNNLNLIGEIPADITNCKFLLELDVSGNNLDGEIPLSVYKMTNLEALDMHHNQLKGSIPSSLGNLSRIQFLDLSHNSFSGSIPPSLGDLNNLTHFDLSFNNLSGVIPDIATIQHFGAPAFSNNPFLCGAPLDITCSANGTRSSSSPPGKTKLLSVSAIVAIVAAAVILTGVCLVTIMSIRARRRKKDDDQIMIVESTPLGSTESSNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGGGSIGTVYKTDFEGGISIAVKKLETLGRIRNQEEFENEIGRLGNLQHCNLVVFQGYYWSSSMQLILSEFVSNGNLYDNLHGFGYPGTSTSRGNRELYWSRRFQIALGTARALASLHHDCRPPILHLNLKSSNILLDDKYEAKLSDYGLGKLLPILDNFGLTKFHNAVGYVAPELAQSFRQSEKCDVYSFGVILLELVTGRKPVESVTAHEVVVLCEYVRSLLETGSASNCFDRNLQGFVENELIQVMKLGLICTSEDPLRRPSMAEIVQVLESIRDGSESH* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0355 892 Pfam Protein kinase domain 606 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0355 892 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Mtr5g0355 892 ProSiteProfiles Protein kinase domain profile. 604 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0355 892 Pfam Leucine rich repeat 392 447 IPR001611 GO:0005515
Mtr5g0355 892 SUPERFAMILY L domain-like 169 504 - -
Mtr5g0355 892 Gene3D Transferase(Phosphotransferase) domain 1 681 892 - -
Mtr5g0355 892 SUPERFAMILY Protein kinase-like (PK-like) 605 883 IPR011009 -
Mtr5g0355 892 Gene3D Ribonuclease Inhibitor 173 508 IPR032675 -
Mtr5g0355 892 PANTHER - 9 891 - -
Mtr5g0355 892 SUPERFAMILY L domain-like 78 165 - -
Mtr5g0355 892 Gene3D Ribonuclease Inhibitor 31 172 IPR032675 -
Mtr5g0355 892 PANTHER UNNAMED PRODUCT 9 891 - -
Mtr5g0355 892 Gene3D Phosphorylase Kinase; domain 1 572 680 - -
Mtr5g0355 892 SMART LRR_typ_2 146 170 IPR003591 -
Mtr5g0355 892 SMART LRR_typ_2 339 362 IPR003591 -
Mtr5g0355 892 SMART LRR_typ_2 459 482 IPR003591 -
Mtr5g0355 892 SMART LRR_typ_2 411 435 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0355 Mtr-Chr5 3283082 3286515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0355 15 891 Receptor kinase-like Gene Family AT1G62950 64.036 0.0 1095
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mtr5g0355 Pkinase 3.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0355 - - mtr:MTR_5g011410 1743.78