Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0352 ATGATGAAAACCAACTACACTATGCAACTGTCATTGCTTGTTAGTCTCATTTTCATTCTCTGCAGCTTCAACCAAATTACATCAGTATTTGCTGCAGAGGAGAATCAAGAGCATGATCACAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCCTTTCAATCAGAAGATTTGCATAGCTGGTACCATTCATTTCTTCCACAAAATTTTCCTCACAAGGACAGAATGGTTTTCTCATACCGCCATGTAGCCTCTGGATTTGCTGTGAAGCTGACACCAGAAGAAGCCAAATCTCTTCAAGAGAAAGATGGAATTTTGTTAGCAAGACCTGAAAGGACACTTTCATTACACACAACTCACAGTCCAACTTTCTTGGGTCTGAAGCATGGACAGGGGTTGTGGAATGATGATAACCTTGGAAAAGGTGTCATAATTGGAGTCATAGACTCAGGAATATTCCCTTCTCATCCATCATTCAATGACGAAGGAATGCCGCCGCCACCTGCAAAATGGAAAGGCCATTGTGAATTCAATGGAATGAAAATATGCAACAATAAGCTCATTGGTGCAAGAAGTTTAGTCAAAAGTACGATTCAAGAGCCTCCATTTGAAAACATTTTCCATGGAACGCACACTGCTGCGGAGGCTGCAGGAAGATTCATAAAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCTAATGCTCACTTAGCAATATACAAAGTGTGCAATGATAAAATAGAATGCCCCGAAAGTGCTATCTTAGCTGCAATGGATATAGCTATTGAAGATGGTGTAGATGTTCTGTCACTTTCACTTGGTTTAGGTTCTCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCTACTCAAAATGGTATTTTTGTTAGCTGCTCTGCCGCAAACTCTGGCCCTGAATACAGCACTCTCTCCAATGAAGCTCCTTGGATCCTCACTGTAGGTGCAAGCACAATTGACAGAAAAATAGTAGCATCAGCAAAACTAGGAAATGGAGAGGAATATGAGGGTGAAACATTATTCCAACCTAAGGATTTTCCTCAACAATTATTTCCACTTGTGTATGCAGGTTCATTGGGATATGGAAACCAAACACAAAATCAGTCATTGTGTCTTCCAGGCTCCCTAAAGAATATTGATCTAAGTGGAAAAGTTGTGTTGTGTGATATAGGTGAAGATGTTTCAACCTTTGTGAAAGGACAAGAAGTTCTAAATGCAAATGGTGTAGCAGTGATTCTTGTAAACTCAGAAAGTGATGGTTTCAGCACTTTTGCTACTGCTCATGTTCTGCCAGCAGTTGAAGTGAGTTATGCAGCTGGTTTAACAATCAAAGATTACATTAACTCAACCTACAATCCAACAGCAACATTGTTATTCAAAGGAACAGTAATTGGTGATTCTTTAGCTCCTTCTGTTGTTTCATTTTCTTCAAGAGGACCAAGCCAACAAAGTCCTGGAATTCTTAAACCAGACATCATTGGTCCAGGTGTCAACATTCTAGCTGCATGGCCTGTTTCAATTGACAACAAGACTCCACCTTTTGCCATTACTTCTGGCACTTCAATGTCTTGTCCTCATCTCAGTGGCATTGCTGCATTGATCAAAAGTTCTCATCCTGATTGGTCGCCAGCTGCAATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTCGGCGGGATTCCTATATTGGATCAAAGACTTTCACCTGCTGATGTTTTTGCTACTGGTGCAGGACATGTTAATCCTGTTAAAGCTAATGATCCTGGTCTTGTTTATGATATTCAACCAGAAGATTACGTTCCTTATCTGTGTGGTTTGGGTTATACTGATCAAGAGATTGAACTTATTGCTCAGTGGGTAGTGAACTGCTCTAATGTGAAAAGTATACCAGAAGCTCAACTGAGTTATCCTTCTTTTTCTATTCTGTTGGGATCAGATTCACAGTATTATACAAGAACTTTGACTAATGTTGGGTTGGCAAATTCTACCTATAGAGTTGAACTTGAAGTCCCTTTGGCTTTTGGTATGAGTGTTAATCCTAGTGAAATAACATTTAGTGAGGTCGATGAGAAGGTTAGTTATTCGGTCGATTTTATACCAAAAACTAAGGAAAGTAGAGGGAACAATACTTATGCTCAGGGTTCTCTCACTTGGGTTTCTGATAAACATGCTGTTAGGATACCAATATCTGTTATTTTCAAGTGA 2271 0.395 MMKTNYTMQLSLLVSLIFILCSFNQITSVFAAEENQEHDHNLMTYIVHVKKSENVASFQSEDLHSWYHSFLPQNFPHKDRMVFSYRHVASGFAVKLTPEEAKSLQEKDGILLARPERTLSLHTTHSPTFLGLKHGQGLWNDDNLGKGVIIGVIDSGIFPSHPSFNDEGMPPPPAKWKGHCEFNGMKICNNKLIGARSLVKSTIQEPPFENIFHGTHTAAEAAGRFIKDASVFGNAKGVAAGMAPNAHLAIYKVCNDKIECPESAILAAMDIAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFAATQNGIFVSCSAANSGPEYSTLSNEAPWILTVGASTIDRKIVASAKLGNGEEYEGETLFQPKDFPQQLFPLVYAGSLGYGNQTQNQSLCLPGSLKNIDLSGKVVLCDIGEDVSTFVKGQEVLNANGVAVILVNSESDGFSTFATAHVLPAVEVSYAAGLTIKDYINSTYNPTATLLFKGTVIGDSLAPSVVSFSSRGPSQQSPGILKPDIIGPGVNILAAWPVSIDNKTPPFAITSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGIPILDQRLSPADVFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLGYTDQEIELIAQWVVNCSNVKSIPEAQLSYPSFSILLGSDSQYYTRTLTNVGLANSTYRVELEVPLAFGMSVNPSEITFSEVDEKVSYSVDFIPKTKESRGNNTYAQGSLTWVSDKHAVRIPISVIFK* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0352 756 Pfam Fibronectin type-III domain 656 753 IPR041469 -
Mtr5g0352 756 SUPERFAMILY Subtilisin-like 121 612 IPR036852 GO:0004252|GO:0006508
Mtr5g0352 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 122 IPR037045 -
Mtr5g0352 756 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 150 161 IPR023827 -
Mtr5g0352 756 Gene3D Peptidase S8/S53 domain 147 621 IPR036852 GO:0004252|GO:0006508
Mtr5g0352 756 Gene3D - 340 485 - -
Mtr5g0352 756 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Mtr5g0352 756 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Mtr5g0352 756 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Mtr5g0352 756 Pfam Peptidase inhibitor I9 44 121 IPR010259 -
Mtr5g0352 756 Pfam PA domain 372 462 IPR003137 -
Mtr5g0352 756 Gene3D - 625 755 - -
Mtr5g0352 756 Pfam Subtilase family 145 578 IPR000209 GO:0006508|GO:0008236
Mtr5g0352 756 ProSiteProfiles Serine proteases, subtilase domain profile. 118 608 - -
Mtr5g0352 756 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 28 755 - -
Mtr5g0352 756 CDD PA_subtilisin_like 348 477 - -
Mtr5g0352 756 CDD Peptidases_S8_3 121 575 IPR034197 -
Mtr5g0352 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 755 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0352 Mtr-Chr5 3256440 3258717 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0352 8 753 Subtilisin-like Serine Gene Family AT5G67360 42.876 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0352 - - gmx:100783595 1124.77