Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0350 ATGATGAAGATGGAGCTTACACTACTTGTTAGCCTCATTTTCATTATATGCAGTATCAACCAAATTACATCAATGTTGATTGCAGAGGAGAATCTAGAACATGATCAAATAAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCTCTTCAATCAGAAGATTTGCATAGTTGGTACCATTCATTCCTTCCACAAACTTTTCCTCACAAAGAAAGAATGGTTTTCTCTTACCGCAAAGTAGCCTCTGGATTTGCTGTGAAGCTAACACCAGAAGAAGCCAAATCTCTTCAAGAGAAAGGTGAAATTGTGTCAGCAAGACCTGAAAGGACCCTTGAATTACATACAACTCACACTCCAACATTCTTGGGTCTGAAACAAGGACAAGGATTGTGGAGCGACGATAACCTTGGAAAAGGCGTCATAATTGGTATCATAGACTCGGGAATATTCCCTTTACATCCATCTTTCAACGACGAAGGAATGCCGCCACCACCTGCAAAATGGAAAGGCCATTGTGAATTCACCGGAGGGCAAGTATGCAACAATAAGCTCATAGGAGCAAGAAACATGGTAAAAAATGCAATTCAAGAGCCTCCGTTTGAGAATTTCTTCCACGGAACTCACACTGCTGCAGAGGCTGCAGGAAGATTCGTAGAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCTAATGCTCACATAGCAATGTACAAAGTTTGTGATGATAACATTCGATGCTTTGAAAGTTCTGTCTTAGCTGCAATAGATATAGCTATTGAAGATGGTGTAGATGTTCTTTCACTTTCACTTGGTTTAGGTTCTCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCTACTCAAAATGGTGTTTTTGTTAGTTGCTCTGCTGCAAACTCTGGTCCTGGATACAGCACTCTTTCCAATGAAGCTCCTTGGATCCTCACTGTTGGTGCAAGCACAATTGATAGAAAAATTGTAGCATCAGCAAAGCTAGGAAATGGAAATGAATATGAAGGTGAAACATTATTCCAACCCAAAGATTTTTCTGAACAATTATTACCTCTTGTGTATGCAGGCTCATTTGGATTCGGAAACCAGACACAGAATCAGTCTTTGTGTCTTCCAGGATCCTTAAAGAACATCGATCTAAGTGGAAAAGTAGTGTTGTGTGATATCGGAGGACGTGTTCCAAGCACTGTGAAAGGACAAGAAGTTTTAAATTCAGGTGGTGTAGCAGTGATTCTTGTAAACTCAGAAAGTGATGGTTTCAGCACTTTTGCTACTGCTCATGTTCTACCTGCGGTTGAAGTGAGTTACAAAGCTGGTTTAACAATCAAAGATTACATAAACTCAACCTACAATCCAACAGCAACATTGATATTCAAAGGAACAGTAATTGGTGATTCTTTAGCTCCTTCTGTTGTTTCATTTTCTTCAAGAGGACCAAGCCAAGAAAGTCCAGGAATTCTTAAACCAGACATCATTGGTCCAGGTGTCAACATTCTAGCTGCATGGGGTGTTTCTGTAGACAACAAAATTCCAGCTTTTAACATTGTTTCCGGTACTTCAATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAGTTCTCACCCTGATTGGTCGCCAGCCGCTATAAAATCAGCAATCATGACAACTGCAAATACTCTCAACCTCGGCGGGATACCTATACTGGATCAAAGGCTTTTGCCGGCTGATATTTTCGCTACTGGTGCAGGACATGTTAATCCTTTTAAAGCTAATGATCCTGGTCTTGTTTATGATATTGAACCAGAAGATTATGTTCCTTATCTTTGTGGTTTGGGTTATTCTGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGCTCTAATGTGAAAAGTATACCAGAAGCTCAATTGAATTATCCTTCTTTTTCTATTCTGTTGGGGTCAGATTCACAATATTATACCAGAACTTTGACTAATGTTGGGTTTGCAAATTCAACATATAGAGTTGAACTTGAAGTGCCTTTGGCTTTGGGTATGAGTGTTAATCCAAGTGAAATAACATTCACTGAGGTGAATGAGAAGGTTAGTTTCTCTGTTGAATTTATACCACAAATAAAGGAAAACAGAAGGAATCAAACTTTTGGTCAGGGCTCCCTCACTTGGGTGTCTGATAAACATGCTGTTAGGGTGCCGATATCTGTCATTTTCAAGTGA 2262 0.3939 MMKMELTLLVSLIFIICSINQITSMLIAEENLEHDQINLMTYIVHVKKSENVASLQSEDLHSWYHSFLPQTFPHKERMVFSYRKVASGFAVKLTPEEAKSLQEKGEIVSARPERTLELHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGIIDSGIFPLHPSFNDEGMPPPPAKWKGHCEFTGGQVCNNKLIGARNMVKNAIQEPPFENFFHGTHTAAEAAGRFVEDASVFGNAKGVAAGMAPNAHIAMYKVCDDNIRCFESSVLAAIDIAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFAATQNGVFVSCSAANSGPGYSTLSNEAPWILTVGASTIDRKIVASAKLGNGNEYEGETLFQPKDFSEQLLPLVYAGSFGFGNQTQNQSLCLPGSLKNIDLSGKVVLCDIGGRVPSTVKGQEVLNSGGVAVILVNSESDGFSTFATAHVLPAVEVSYKAGLTIKDYINSTYNPTATLIFKGTVIGDSLAPSVVSFSSRGPSQESPGILKPDIIGPGVNILAAWGVSVDNKIPAFNIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGIPILDQRLLPADIFATGAGHVNPFKANDPGLVYDIEPEDYVPYLCGLGYSDKEIEVIVQWKVKCSNVKSIPEAQLNYPSFSILLGSDSQYYTRTLTNVGFANSTYRVELEVPLALGMSVNPSEITFTEVNEKVSFSVEFIPQIKENRRNQTFGQGSLTWVSDKHAVRVPISVIFK* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0350 753 Pfam PA domain 369 459 IPR003137 -
Mtr5g0350 753 ProSiteProfiles Serine proteases, subtilase domain profile. 126 605 - -
Mtr5g0350 753 Pfam Fibronectin type-III domain 652 750 IPR041469 -
Mtr5g0350 753 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 25 752 - -
Mtr5g0350 753 SUPERFAMILY Subtilisin-like 118 609 IPR036852 GO:0004252|GO:0006508
Mtr5g0350 753 Gene3D Peptidase S8/S53 domain 144 618 IPR036852 GO:0004252|GO:0006508
Mtr5g0350 753 CDD PA_subtilisin_like 345 474 - -
Mtr5g0350 753 Gene3D - 337 482 - -
Mtr5g0350 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 119 IPR037045 -
Mtr5g0350 753 Pfam Subtilase family 142 575 IPR000209 GO:0006508|GO:0008236
Mtr5g0350 753 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Mtr5g0350 753 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Mtr5g0350 753 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Mtr5g0350 753 CDD Peptidases_S8_3 116 572 IPR034197 -
Mtr5g0350 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 752 IPR045051 -
Mtr5g0350 753 Pfam Peptidase inhibitor I9 41 119 IPR010259 -
Mtr5g0350 753 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 147 158 IPR023827 -
Mtr5g0350 753 Gene3D - 622 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0350 Mtr-Chr5 3247289 3250079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0350 41 750 Subtilisin-like Serine Gene Family AT5G67360 44.520 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0350 - - gmx:100783595 1164.06