Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0349 ATGATGAAGATGGAGCTTAGATTGCTTGTTAGCCTCATTTTCATTCTCTGCAGCATATCAATGTTGGCTGCAGAGGAGAATCTAGAACATGATCAAATAAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCTCATCAATCAGAAGATTTGCATAGTTGGTACCATTCATTCCTTCCACAAACTTTTCCTCACAAAGAAAGAATGGTTTTCTCTTACCGCAAAGTAGCCTCTGGATTTGCTGTGAAGCTAACACCAGAAGAAGCCAAATCTCTTCAAGAGAAAGGTGAAATTGTGTCAGCAAGACCTGAAAGGACCCTTGAATTACACACAACTCACACTCCAACTTTCTTGGGTCTGAAACAAGGACAAGGATTGTGGAGCGACGATAATCTTGGAAAAGGCGTCATAATTGGTATCATAGACACGGGAATATTCCCTTTACATCCATCTTTCAACGACGAAGGAATGCCGCCACCACCTGCAAAATGGAAAGGTCATTGTGAATTCACCGGAGGGCAAGTATGCAACAATAAGCTCATAGGTGCAAGAAACTTGGTCAAAAGTGCAATTCAAGAGCCTCCATTTGAGAATTTCTTCCATGGAACACACACCGCTGCCGAGGCTGCAGGAAGATTCATAGAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCAGGAATGGCACCTAATGCCCACTTAGCAATATACAAAGTGTGTAATGACAAAATTGGATGCACTGAAAGTGCTATCTTAGCTGCAATGGATATTGCTATCGAAGATGGTGTAGATGTTCTTTCACTTTCACTTGGTTTAGGTTCCCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCAACTCAAAATGGTGTTTTTGTTAGTTGCTCTGCTGCAAACTCTGGTCCTGGATATAGCACTCTCTCCAATGAAGCTCCTTGGATCCTCACTGTTGGTGCTAGCACAATTGACAGAAAAATTGTAGCATCAGCAAAGCTAGGAAATGGTGAAGAATATGAAGGTGAAACGTTGTTCCAACCCAAAGACTTTTCTCAACAACTATTGCCACTTGTGTATCCAGGTTCATTTGGATATGGAAACCAAACACAGAATCAGTCCTTGTGTTTACCAGGATCCTTAAAGAACATTGATTTAAGCGGAAAAGTAGTGCTGTGTGATGTAGGAAATGTCTCAAGTATTGTGAAAGGACAAGAAGTTCTAAATTCAGGTGGTATAGCAATGATACTTGCAAATTCAGAAGCACTTGGTTTCAGTACTTTTGCTATTGCTCATGTTCTACCTGCAGTTGAAGTGAGTTATGCAGCTGGTTTAACAATCAAATCTTACATAAAATCAACATACAATCCGACAGCAACATTGATATTTAAAGGAACGATAATTGGTGATTCTTTAGCTCCTTCTGTTGTTTACTTTTCTTCAAGAGGACCAAGCCAAGAAAGTCCAGGAATTCTTAAACCAGACATCATTGGTCCAGGTGTCAACATTCTAGCTGCATGGGCTGTTTCTGTAGACAACAAAATTCCAGCTTTTGACATTGTTTCGGGTACTTCGATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAGTTCTCATCCTGATTGGTCACCAGCCGCTATAAAATCGGCAATCATGACAACTGCAAATACTCTCAACCTCGGCGGGATCCCTATACTGGATCAAAGGCTTTTTCCGGCTGATATTTTCGCTACTGGTGCAGGACATGTTAATCCTGTTAAAGCTAATGATCCTGGTCTTGTTTATGATATTGAACCAGAAGATTATGTTCCTTATCTATGTGGTTTGGGTTATTCTGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGCTCTAATGTGAAAAGTATACCAGAAGCACAGCTGAACTATCCTTCTTTCTCTATTCTGTTGGGGTCTGATTCACAGTATTATACTAGAACTTTGACTAATGTTGGGTTTGCAAATTCAACTTATAAAGTTGAACTTGAAGTACCTTTAGCTTTGGGTATGAGTGTTAATCCAAGTGAAATAACATTCACTGAGGTGAATGAGAAGGTTAGTTTCTCTGTTGAATTTATACCACAAATAAAGGAAAACAGAAGGAATCATACTTTTGGTCAGGGCTCTCTCACTTGGGTGTCTGATAGACATGCTGTTAGGATCCCAATATCTGTCATTTTTAAGTGA 2247 0.3961 MMKMELRLLVSLIFILCSISMLAAEENLEHDQINLMTYIVHVKKSENVASHQSEDLHSWYHSFLPQTFPHKERMVFSYRKVASGFAVKLTPEEAKSLQEKGEIVSARPERTLELHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGIIDTGIFPLHPSFNDEGMPPPPAKWKGHCEFTGGQVCNNKLIGARNLVKSAIQEPPFENFFHGTHTAAEAAGRFIEDASVFGNAKGVAAGMAPNAHLAIYKVCNDKIGCTESAILAAMDIAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFAATQNGVFVSCSAANSGPGYSTLSNEAPWILTVGASTIDRKIVASAKLGNGEEYEGETLFQPKDFSQQLLPLVYPGSFGYGNQTQNQSLCLPGSLKNIDLSGKVVLCDVGNVSSIVKGQEVLNSGGIAMILANSEALGFSTFAIAHVLPAVEVSYAAGLTIKSYIKSTYNPTATLIFKGTIIGDSLAPSVVYFSSRGPSQESPGILKPDIIGPGVNILAAWAVSVDNKIPAFDIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGIPILDQRLFPADIFATGAGHVNPVKANDPGLVYDIEPEDYVPYLCGLGYSDKEIEVIVQWKVKCSNVKSIPEAQLNYPSFSILLGSDSQYYTRTLTNVGFANSTYKVELEVPLALGMSVNPSEITFTEVNEKVSFSVEFIPQIKENRRNHTFGQGSLTWVSDRHAVRIPISVIFK* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0349 748 CDD PA_subtilisin_like 341 469 - -
Mtr5g0349 748 SUPERFAMILY Subtilisin-like 114 604 IPR036852 GO:0004252|GO:0006508
Mtr5g0349 748 Gene3D Peptidase S8/S53 domain 140 613 IPR036852 GO:0004252|GO:0006508
Mtr5g0349 748 Gene3D - 333 477 - -
Mtr5g0349 748 Pfam Fibronectin type-III domain 647 745 IPR041469 -
Mtr5g0349 748 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 143 154 IPR023827 -
Mtr5g0349 748 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 23 747 - -
Mtr5g0349 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 747 IPR045051 -
Mtr5g0349 748 Pfam Subtilase family 138 570 IPR000209 GO:0006508|GO:0008236
Mtr5g0349 748 Pfam PA domain 365 454 IPR003137 -
Mtr5g0349 748 CDD Peptidases_S8_3 112 567 IPR034197 -
Mtr5g0349 748 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Mtr5g0349 748 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Mtr5g0349 748 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Mtr5g0349 748 ProSiteProfiles Serine proteases, subtilase domain profile. 122 600 - -
Mtr5g0349 748 Pfam Peptidase inhibitor I9 37 115 IPR010259 -
Mtr5g0349 748 Gene3D - 617 747 - -
Mtr5g0349 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0349 Mtr-Chr5 3241008 3243254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0349 14 748 Subtilisin-like Serine Gene Family AT1G04110 42.105 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0349 - - gmx:100783595 1174.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0349 5 3241008 3243254 Mtr5g0349 5 3241008 3243254 ECH