Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0348 ATGCATGATAGTAGGCAAATCACAAGCAATTCTTTCTTTATCTTCATCAAATCCCAAATCATGATGAAAACCAACTACACTATGCAACTGTCATTGCTTGTTAGTCTCATTTTCATTCTCTGCAGCTTCAACCAAATTACATCAGTATTTGCTGCAGAGGAGAATCAAGAGCATGATCACAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCCTTTCAATCAGAAGATTTGCATAGCTGGTACCATTCATTTCTTCCACAAAATTTTCCTCACAAGGACAGAATGGTTTTCTCATACCGCCATGTAGCCTCTGGATTTGCTGTGAAGCTGACACCAGAAGAAGCCAAATCTCTTCAAGAGAAAGATGGAATTTTGTTAGCAAGACCTGAAAGGACACTTTCATTACACACAACTCACAGTCCAACTTTCTTGGGTCTGAAGCATGGACAGGGGTTGTGGAATGATGATAACCTTGGAAAAGGTGTCATAATTGGAGTCATAGATTCAGGAATATACCCTTATCATCCATCATTCAACGATGAAGGAATGCCGCCACCACCTGCAAAATGGAAAGGCCATTGCGAATTCACTGGAGGGAAAATATGCAATAATAAGCTCATCGGTGCAAGAAGTTTAGTCAAAAGCACGATTCAAGAGCTTCCACTTGAAAAACATTTCCACGGAACACACACTGCTGCTGAGGCTGCAGGAAGATTCGTAGAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCTAATGCTCACATAGCAATGTACAAAGTTTGTACTGATAACATTCCATGCGCTGAAAGTTCTATCTTAGCTGCAATGGATATTGCTATTGAAGATGGTGTAGATGTTCTTTCACTTTCACTAGGTTTAGGTTCTCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCTACTCAAAATGGTGTTTTTGTTAGTTGCTCTGCTGCAAACTCCGGTCCTGGATACAGCACTCTCTCCAATGAAGCTCCTTGGGTCCTCACTGTTGGTGCCAGCACAATTGATAGAAAAATTGTAGCATTAGCAAAGCTAGGAAATGGAAATGAATATGAAGGTGAAACATTATTCCAACCGAAAGACTTTTCTGAACAATTAATGCCACTTGTATATTCAGGTTCATTTGGATTTGGAAACCAGACACAGAATCAGTCTTTGTGTCTTCCAGGATCCTTAAAGAACATTGATCTAAGTGGAAAAGTAGTGGTGTGTGATGTCGGAGGACGTGTTTCAACTATTGTGAAAGGACAAGAAGTTCTAAATTCAGGCGGTGTTGCTATGATCCTTGCAAATTCAGAAACACTTGGTTTCAGCACTTCTGCTACTGCTCATGTTTTACCTGCGGTTCAACTGAGTTACGCAGCTGGTTTAACAATCAAAGAATACATAAAATCAACTTACAATCCATCAGCAACATTGATATTCAAAGGAACAGTAATTGGTGATTCTTTAGCTCCTTCTGTTGTTTCATTTTCTTCAAGAGGACCAAGCCAAGAAAGTCCTGGAATTCTTAAACCAGACATCATTGGTCCAGGTGTCAACATTCTAGCTGCATGGGGTGTTTCTGTAGACAACAAAATTCCAGCTTTTAACATTGTTTCCGGTACTTCAATGTCTTGTCCTCACCTAAGTGGTATTTCTGCATTGATCAAAAGTTCTCACCCTGATTGGTCACCAGCCGCTATAAAATCAGCAATCATGACAACTGCAAATACTCTCAACCTCGGCGGGATACCTATACTGGATCAAAGGCTTTTGCCGGCTGATATTTTTGCTACTGGTGCAGGACATGTTAATCCTGTTAAAGCTAATGATCCTGGTCTTGTTTATGATATTGAACCAGAAGATTATGTTCCTTATCTGTGTGGTTTGGGTTATTCTGATAAAGAGATTGAAGTTATTGTTCAACGGAAAGTGAAGTGTTCTAATGTGAAAAGTATACCAGAAGCTCAATTGAATTATCCTTCTTTTTCTATTCTGTTGGGGTCAGATTCACAATATTATACAAGAACTTTGACTAATGTTGGGTTTGCAAATTCAACTTATAAAGTTGAACTTGAAGTACCTTTGGCTTTGGGTATGAGTGTTAATCCGAGTGAAATAACATTCACTGAGGTCAATGAGAAGGTTAGTTTTTCTATTGAATTTATACCACAAATAAAGGAAAACAGAAGGAGTCAAACTTTTGCTCAGGGCTCTCTCACTTGGGTGTCTGATAAACATGCTGTTAGGATCCCTATATCTGTCATTTTTAAGTGA 2331 0.3904 MHDSRQITSNSFFIFIKSQIMMKTNYTMQLSLLVSLIFILCSFNQITSVFAAEENQEHDHNLMTYIVHVKKSENVASFQSEDLHSWYHSFLPQNFPHKDRMVFSYRHVASGFAVKLTPEEAKSLQEKDGILLARPERTLSLHTTHSPTFLGLKHGQGLWNDDNLGKGVIIGVIDSGIYPYHPSFNDEGMPPPPAKWKGHCEFTGGKICNNKLIGARSLVKSTIQELPLEKHFHGTHTAAEAAGRFVEDASVFGNAKGVAAGMAPNAHIAMYKVCTDNIPCAESSILAAMDIAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFAATQNGVFVSCSAANSGPGYSTLSNEAPWVLTVGASTIDRKIVALAKLGNGNEYEGETLFQPKDFSEQLMPLVYSGSFGFGNQTQNQSLCLPGSLKNIDLSGKVVVCDVGGRVSTIVKGQEVLNSGGVAMILANSETLGFSTSATAHVLPAVQLSYAAGLTIKEYIKSTYNPSATLIFKGTVIGDSLAPSVVSFSSRGPSQESPGILKPDIIGPGVNILAAWGVSVDNKIPAFNIVSGTSMSCPHLSGISALIKSSHPDWSPAAIKSAIMTTANTLNLGGIPILDQRLLPADIFATGAGHVNPVKANDPGLVYDIEPEDYVPYLCGLGYSDKEIEVIVQRKVKCSNVKSIPEAQLNYPSFSILLGSDSQYYTRTLTNVGFANSTYKVELEVPLALGMSVNPSEITFTEVNEKVSFSIEFIPQIKENRRSQTFAQGSLTWVSDKHAVRIPISVIFK* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0348 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 46 775 IPR045051 -
Mtr5g0348 776 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 46 775 - -
Mtr5g0348 776 SUPERFAMILY Subtilisin-like 141 632 IPR036852 GO:0004252|GO:0006508
Mtr5g0348 776 Pfam Fibronectin type-III domain 675 773 IPR041469 -
Mtr5g0348 776 PRINTS Subtilisin serine protease family (S8) signature 165 184 IPR015500 -
Mtr5g0348 776 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Mtr5g0348 776 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Mtr5g0348 776 Pfam PA domain 392 482 IPR003137 -
Mtr5g0348 776 Pfam Subtilase family 165 598 IPR000209 GO:0006508|GO:0008236
Mtr5g0348 776 Gene3D - 645 775 - -
Mtr5g0348 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 47 142 IPR037045 -
Mtr5g0348 776 Gene3D - 360 505 - -
Mtr5g0348 776 Gene3D Peptidase S8/S53 domain 167 641 IPR036852 GO:0004252|GO:0006508
Mtr5g0348 776 ProSiteProfiles Serine proteases, subtilase domain profile. 138 628 - -
Mtr5g0348 776 Pfam Peptidase inhibitor I9 64 141 IPR010259 -
Mtr5g0348 776 CDD PA_subtilisin_like 368 497 - -
Mtr5g0348 776 CDD Peptidases_S8_3 141 595 IPR034197 -
Mtr5g0348 776 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 170 181 IPR023827 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0348 Mtr-Chr5 3235637 3238228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0348 28 773 Subtilisin-like Serine Gene Family AT5G67360 43.208 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0348 - - gmx:100783595 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0348 5 3235637 3238228 Mtr5g0348 5 3235637 3238228 ECH