Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0347 ATGTTTTTTTCACCATCCACACAAATTAACATGAACATAAACAAGATGGAACTCACTCCAATCTTGCTTCTTGGTTTCATTCTCCTGCTAAGCATATGTCAAACTTCAGCAAATAAATACCAAAAATTAGCAGCTGCAAATGAAGGACTAGAAGATCAAAGTAGCTTGTTGACTTACATTGTTCACGTTGAAAAGCCTTCTCTTCAATCTAAGGAGAGTTTGGATGGCTGGTACAATTCACTCTTGCCAGCAGCCACCATAAAAACTCAAAACCAGCAACGCGTAATTTTCTCATACCAAAACGTCATGAATGGATTCGCCGTGAAATTGACCCCAGAAGAAGCCAAGGCTCTAGAAGAGAAGGAGGAGGTTCTATCAATTCGACCAGAAAACATCCTCTCATTACATACAACTCACACACCAAGCTTCTTGGGGTTGCAACAGAGTCAAGGATTATGGATAAATTCCAATCTCGGTAAAGGGATCATAATTGGAATCCTGGACACAGGAATATCCCTCTCCCATCCTTCCTTTTCTGACGAGGGAATGCCCTCTCCACCTGCAAAATGGAATGGCCACTGTGAATTCACAGGGGAAAGGATTTGTAACAAGAAGCTCATTGGAGCAAGGAACTTCGTCACAGACACAAATTTATCTCTTCCATTCGATGATGTTGGCCACGGAACTCACACGGCCAGCACGGCTGCTGGAAGGCTTGTACAGGGGGCCAATGTCTTCGGCAACGCTAAAGGTACGGCAACAGGCATGGCACCAGATGCACACTTGGCAATCTACAAAGTATGCAGCAGCAGTGGTTGTCCTGAGAGTGCAACATTAGCAGGAATGGATGCTGCAGTTGAAGACGGTGTTGATGTACTTTCAATCTCCCTTAACGGACCCACCAACCCTTTCTTTGAAGATGTAATTGCACTTGGTGCATTTAGTGCAAATCAAAAGGGAATTTTCGTTAGTTGCTCAGCTGGAAATTTTGGTCCTGATTATGGTACAACGTCTAATGAAGCACCATGGATTCTAACTGTTGGTGCTAGCACAACTGATAGAAAAATAGAAGCAATAGCTAAACTTGGCAACGGGGAAAAATATATTGGAGAATCAGTGTTTCAACCAAAAGAGTTTGCATCAACACTGTTGCCACTTGTGTATGCAGGTTCTGTTAATATAAGTGATAATTCCATTGCCTTTTGTGGTCCTATTTCCATGAAGAACATTGATGTTAAGGGAAAGGTAGTTTTGTGTGAGGAAGGTGGACTTGTTTCACAAGCAGCGAAAGCTCAAGCAGTTAAAGACGCTGGTGGATCTGCCATGATCCTCATGAATAGTAAACTTCAAGGTTTTGATCCAAAATCCGATGTTCAAGACAATCTACCTGCTGCACTTGTAAGTTACTCTGCTGGTTTATCCATCAAAGATTATATAAACTCAACTTCAACACCAATGGCCACGATTTTATTCAATGGAACTGTTATTGGAAATCCCAATGCCCCTCAAGTAGCTTACTTTTCATCAAGAGGACCAAACCAAGAAAGCCCAGGAATTCTGAAACCAGACATAATTGGACCTGGAGTGAACATTCTAGCAGCATGGCATGTATCATTGGACAACAATATACCACCATACAACATCATTTCAGGTACCTCAATGTCTTGTCCACATCTCAGTGGAATTGCTGCTCTGTTGAAAAACTCTCATCCAGATTGGTCTCCCGCTGCTATAAAATCAGCAATCATGACAACTGCTTATGAAGTTAATCTTCAAGGAAAAGCTATTTTGGACCAAAGACTTAAACCAGCTGATTTATTTGCCACTGGTGCTGGACATGTCAACCCTTCGAAAGCAAACGATCCAGGACTTGTTTATGATATTGAACCAAATGATTATGTTCCTTACTTGTGTGGTTTGAATTACACTGATAGACATGTTGGAATTATTTTGCAACAGAAAGTGAAATGCTCTGATATAAAGAGCATACCACAAGCACAGCTTAATTATCCATCATTTTCTATATTGTTGGGGTCTACTTCTCAGTTTTATACTAGAACGGTGACGAATGTTGGACCTATCAACATGACTTACAATGTGGAAATTGATGTTCCTTTGGCTGTGGATATCAGTATAAAGCCTGCTCAAATAACATTCACTGAGAAGAAGCAAAAAGTTACATACTCGGTTGCTTTTACACCCGAAAACATAGTGAATAGAGGTGATAAGGAAATTTCTCAGGGATCTATCAAGTGGGTTTCTGGAAAGTATACCGTTAGAATCCCTATATCTGTCATTTTTGTGTGA 2307 0.4088 MFFSPSTQINMNINKMELTPILLLGFILLLSICQTSANKYQKLAAANEGLEDQSSLLTYIVHVEKPSLQSKESLDGWYNSLLPAATIKTQNQQRVIFSYQNVMNGFAVKLTPEEAKALEEKEEVLSIRPENILSLHTTHTPSFLGLQQSQGLWINSNLGKGIIIGILDTGISLSHPSFSDEGMPSPPAKWNGHCEFTGERICNKKLIGARNFVTDTNLSLPFDDVGHGTHTASTAAGRLVQGANVFGNAKGTATGMAPDAHLAIYKVCSSSGCPESATLAGMDAAVEDGVDVLSISLNGPTNPFFEDVIALGAFSANQKGIFVSCSAGNFGPDYGTTSNEAPWILTVGASTTDRKIEAIAKLGNGEKYIGESVFQPKEFASTLLPLVYAGSVNISDNSIAFCGPISMKNIDVKGKVVLCEEGGLVSQAAKAQAVKDAGGSAMILMNSKLQGFDPKSDVQDNLPAALVSYSAGLSIKDYINSTSTPMATILFNGTVIGNPNAPQVAYFSSRGPNQESPGILKPDIIGPGVNILAAWHVSLDNNIPPYNIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTAYEVNLQGKAILDQRLKPADLFATGAGHVNPSKANDPGLVYDIEPNDYVPYLCGLNYTDRHVGIILQQKVKCSDIKSIPQAQLNYPSFSILLGSTSQFYTRTVTNVGPINMTYNVEIDVPLAVDISIKPAQITFTEKKQKVTYSVAFTPENIVNRGDKEISQGSIKWVSGKYTVRIPISVIFV* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0347 768 CDD PA_subtilisin_like 361 489 - -
Mtr5g0347 768 Pfam Peptidase inhibitor I9 58 136 IPR010259 -
Mtr5g0347 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 767 IPR045051 -
Mtr5g0347 768 SUPERFAMILY Subtilisin-like 135 624 IPR036852 GO:0004252|GO:0006508
Mtr5g0347 768 Pfam Fibronectin type-III domain 667 765 IPR041469 -
Mtr5g0347 768 Gene3D - 637 767 - -
Mtr5g0347 768 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 40 767 - -
Mtr5g0347 768 Gene3D - 353 497 - -
Mtr5g0347 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 43 136 IPR037045 -
Mtr5g0347 768 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 164 175 IPR023827 -
Mtr5g0347 768 CDD Peptidases_S8_3 135 587 IPR034197 -
Mtr5g0347 768 Pfam Subtilase family 159 594 IPR000209 GO:0006508|GO:0008236
Mtr5g0347 768 Pfam PA domain 385 474 IPR003137 -
Mtr5g0347 768 Gene3D Peptidase S8/S53 domain 161 633 IPR036852 GO:0004252|GO:0006508
Mtr5g0347 768 PRINTS Subtilisin serine protease family (S8) signature 159 178 IPR015500 -
Mtr5g0347 768 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Mtr5g0347 768 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Mtr5g0347 768 ProSiteProfiles Serine proteases, subtilase domain profile. 143 620 - -
Mtr5g0347 768 SUPERFAMILY PA domain 409 503 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0347 Mtr-Chr5 3230823 3233576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0347 16 765 Subtilisin-like Serine Gene Family AT1G04110 42.317 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0347 - - gmx:100799902 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0347 5 3230823 3233576 Mtr5g0347 5 3230823 3233576 ECH