Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0345 ATGACCTTAACCAAGATGGAACTAACTCCAATATTGCTTATTGGTTTCATTCTTGTGCTAAGTATCTATACAACTTCAGCACATAAATACCAAGAATTCACAGCTACAAATGAAGGACTAGAAGATGAAAGTAGCTTATTGACTTACATTGTTCATGTCAATAAGCCTTCTCTTCAATCTAAGGAGAGTTTGCATGGTTGGTACCATTCACTCTTGCCACAAGCCACTACAGAAACTCAAAACCAGCAGCGTATTATTTTCTCATACAGAAACATTGTGGCTGGATTTGCCGTGAAATTGACCCCGGAAGAAGCCAAGGTTCTAGAAGAGAATGAGGAGGTTCTGTCAATTCGACCAGAAAAGATTTTCTCATTACACACAACTCACACTCCAAGCTTCTTGGGGTTGCAACAGAATCAAGAATTGTGGGGAAATTCCAATCAAGGTAAAGGGATCATAATTGGAATGCTGGACACAGGAATAACCCTCTCACATCCTTCCTTTTCCGATGAGGGAATGCCTTCTCCACCTGCAAAATGGAATGGCCATTGTGAATTCACAGGGGAGAGGATTTGTAACAAGAAGATCATTGGAGCAAGGAACATCGTAAATTCATCCCTTCCATACGATTATGTTGGCCACGGAACTCACACGGCCAGCACGGCCGCTGGAAGGCCCGTGAAAGGTGCTAATGTCTTTGGTAATGCCAATGGTACTGCAATTGGCATGGCACCATATGCACACTTGGCAATTTACAAAGTATGCGGCGTCTTTGGTTGTGCTGAAAGTGTCATATTAGCTGGAATGGATGTTGCTGTTGATGATGGTGTTGATGTTCTTTCTCTCTCCCTTGGACAACCCTCTACTTCTTTCTTTGAAAGTGGAATTGCACTTGGTGCATTTAGTGCAATTCAAAAGGGAATTTTTGTTAGTTGTTCTGCTGGAAATTCAGGTCCTTTTCATGGTACATTGGCTAATGAAGCACCATGGATTTTAACTGTTGGTGCCAGCACAATTGACAGAAAAATAGAGGCAGTAGCTAAGCTTGGGGATGGGACGGAATATCTCGGAGAATCAGTTTTCCAACCAAAAGACTTTGCATCAACATTATTGCCACTTGTGTATGCAGGTGCAATTAACACAAGTGATGATTTCATTGCCTTTTGTAATCCTTTTTCCATGGAGAATGTTGATGTTAAGGGAAAGGTAGTAGTGTGTGAGCAAGATGGATCGGTTGAAAGAGTAGCCAAAGGTCAAGCAGTTAAAGATGCTGGTGGTGCTGCTATGATACTTTTGAATGGTGAAGATGAAGCTTTCAATCCAATTGCTGATGTTCATGTTCTACCTGCTGTGCATGTAAGTTACTCTGCTGGTTTATCCATCAAAGATTATATAAACTCAACTTCAACACCAATGGCCACAATTTTATTCAAAGGAACTGTTATTGGAAATCCACTTTCCCCTCAAGTTGCTTCATTTTCATCAAGAGGTCCAAGCAAAACAAGCCCTGGAATTCTGAAACCAGACATAATTGGACCTGGATTGAACATTCTAGCAGGATGGCCTATATCATTAGACAATAGTACATCATCGTTTAACATAATTGCAGGTACCTCGATGTCTTGTCCTCATCTTAGTGGCATTGCTGCTTTGTTGAAAAACTCGCATCCAGATTGGTCACCAGCAGCTATAAAATCAGCAATCATGACGACTGCTAATCATGTTAATCTCCATGGTAAGCCTATTTTGGACCAAAGGCTTCTACCAGCTGATGTATTTGCCACTGGTGCTGGACATGTTAACCCTTCAAAAGCAAACGATCCGGGACTTGTTTATGATATTGAAACAAATGATTATGTTCCTTATTTGTGTGGTTTGAATTATACTGATATACAAGTTGGAATTATATTGCAACAAAAAGTGAAATGCTCTGATGTAAAGAGCATACCACAAGCACAACTTAATTACCCATCAATTTCTATTCGGTTGGGGAATACTTCACAGTTTTATAGTAGAACGTTGACAAATGTTGGACCGGTTAACACAACTTACAATGTGGTAATTGATGTGCCTGTGGCAGTACGTATGAGTGTAAGGCCATCTCAAATAACATTCACCGAGGTGAAGCAAAAGGTAACATATTGGGTTGATTTTATACCTGAAGACAAAGAGAATAGAGGTGATAACTTTATTGCTCAAGGATCTATCAAGTGGATTTCTGCAAAGTATTCTGTTAGCATTCCTATTGCTGTCGTATTTGTGTGA 2265 0.4026 MTLTKMELTPILLIGFILVLSIYTTSAHKYQEFTATNEGLEDESSLLTYIVHVNKPSLQSKESLHGWYHSLLPQATTETQNQQRIIFSYRNIVAGFAVKLTPEEAKVLEENEEVLSIRPEKIFSLHTTHTPSFLGLQQNQELWGNSNQGKGIIIGMLDTGITLSHPSFSDEGMPSPPAKWNGHCEFTGERICNKKIIGARNIVNSSLPYDYVGHGTHTASTAAGRPVKGANVFGNANGTAIGMAPYAHLAIYKVCGVFGCAESVILAGMDVAVDDGVDVLSLSLGQPSTSFFESGIALGAFSAIQKGIFVSCSAGNSGPFHGTLANEAPWILTVGASTIDRKIEAVAKLGDGTEYLGESVFQPKDFASTLLPLVYAGAINTSDDFIAFCNPFSMENVDVKGKVVVCEQDGSVERVAKGQAVKDAGGAAMILLNGEDEAFNPIADVHVLPAVHVSYSAGLSIKDYINSTSTPMATILFKGTVIGNPLSPQVASFSSRGPSKTSPGILKPDIIGPGLNILAGWPISLDNSTSSFNIIAGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTANHVNLHGKPILDQRLLPADVFATGAGHVNPSKANDPGLVYDIETNDYVPYLCGLNYTDIQVGIILQQKVKCSDVKSIPQAQLNYPSISIRLGNTSQFYSRTLTNVGPVNTTYNVVIDVPVAVRMSVRPSQITFTEVKQKVTYWVDFIPEDKENRGDNFIAQGSIKWISAKYSVSIPIAVVFV* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0345 754 Gene3D Peptidase S8/S53 domain 151 619 IPR036852 GO:0004252|GO:0006508
Mtr5g0345 754 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 33 126 IPR037045 -
Mtr5g0345 754 Pfam PA domain 372 460 IPR003137 -
Mtr5g0345 754 Gene3D - 340 483 - -
Mtr5g0345 754 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 154 165 IPR023827 -
Mtr5g0345 754 CDD PA_subtilisin_like 346 475 - -
Mtr5g0345 754 CDD Peptidases_S8_3 125 573 IPR034197 -
Mtr5g0345 754 ProSiteProfiles Serine proteases, subtilase domain profile. 133 606 - -
Mtr5g0345 754 Pfam Subtilase family 149 575 IPR000209 GO:0006508|GO:0008236
Mtr5g0345 754 Pfam Peptidase inhibitor I9 48 126 IPR010259 -
Mtr5g0345 754 Gene3D - 623 753 - -
Mtr5g0345 754 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Mtr5g0345 754 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Mtr5g0345 754 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Mtr5g0345 754 SUPERFAMILY PA domain 371 495 IPR046450 -
Mtr5g0345 754 Pfam Fibronectin type-III domain 653 751 IPR041469 -
Mtr5g0345 754 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 753 IPR045051 -
Mtr5g0345 754 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 31 753 - -
Mtr5g0345 754 SUPERFAMILY Subtilisin-like 125 610 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0345 Mtr-Chr5 3217059 3219323 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0345 48 753 Subtilisin-like Serine Gene Family AT1G04110 42.895 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0345 - - gmx:100799902 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0345 5 3217059 3219323 Mtr5g0345 5 3217059 3219323 ECH