Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0340 ATGATATATCTATCTATATATATAAACATGCATGATAGTAGGCAAATCACAAGCAATTCTTTCTTTATCTTCATCAAATCCCAAATCATGATGAAAACCAACTACACTATGCAACTGTCATTGCTTGTTAGTCTCATTTTCATTCTCTGCAGCTTCAACCAAATTACATCAGTATTTGCTGCAGAGGAGAATCAAGAGCATGATCACAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCCTTTCAATCAGAAGATTTGCATAGCTGGTACCATTCATTTCTTCCACAAAATTTTCCTCACAAGCACAGAATGGTTTTCTCATACCGCCATGTAGCCTCTGGATTTGCTGTGAAGCTGACACCAGAAGAAGCCAAATCTCTTCAAGAGAAAGATGGGATTTTGTTAGCAAGACCTGAAAGGACACTTTCATTACACACAACTCACAGTCCAACTTTCTTGGGTCTGAAGCATGGACAGGGGTTGTGGAATGATGATAACCTTGGAAAAGGTGTCATAATTGGAGTCATAGACTCAGGAATATTCCCTTCTCATCCATCATTCAATGACGAAGGAATGCCGCCGCCACCTGCAAAATGGAAAGGCCATTGTGAATTCAATGGAACGAAAATATGCAACAATAAGCTCATTGGTGCAAGAAGTTTAGTCAAAAGTACGATTCAAGAGCCTCCATTTGAAAACATTTTCCATGGAACGCACACTGCTGCGGAGGCTGCAGGAAGATTCATAAAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCTAATGCTCACTTAGCAATATACAAAGTGTGCAATGATAAAATAGAATGCCCCGAAAGTGCTATCTTAGCTGCAATGGATATAGCTATTGAAGATGGTGTAGATGTTCTGTCACTTTCACTTGGTTTAGGTTCTCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCTACTAAAAATGGTGTTTTTGTTAGCTGCTCTGCCGGAAACTCTGGCCCTGAATACAGCACTCTCTCGAATGAAGCTCCTTGGATCCTCACTGTAGGTGCAAGCACAATTGACAGAAAAATAGTAGCATCAGCAAAACTAGGAAATGGAGAGGAATATGAGGGTGAAACATTATTCCAACCTAAGGATTTTCCTCAACAATTATTTCCACTTGTGTATGCAGGTTCATTGGGATATGGAAACCAAACACAAAATCAGTCATTGTGTCTTCCAGGCTCCTTAAAGAATATTGATCTAAGTGGAAAAGTTGTGTTGTGTGATATAGGTGAAGATGTTTCAACCTTTGTGAAAGGACAAGAAGTTCTAAATGCAAATGGTGTAGCAGTGATTCTTGTAAACTCAGAAAGTGATGGTTTCAGCACTTTTGCTACTGCTCATGTTCTGCCAGCAGTTGAAGTAAGTTATGCAGCTGGTTTAACAATCAAAGATTACATTAACTCAACCTACAATCCAACAGCAACATTGTTATTCAAAGGAACAGTAATTGGTGATTCTTTAGCTCCTTCTGTTGTTTCATTTTCTTCAAGAGGACCAAGCCAACAAAGTCCTGGAATTCTTAAACCAGACATCATTGGTCCAGGTGTCAACATTCTAGCTGCATGGCCTGTTTCAATTGACAACAAGACTCCACCTTTTGCCATTACTTCTGGCACTTCAATGTCTTGTCCTCATCTCAGTGGCATTGCTGCATTGATCAAAAGTTCTCATCCTGATTGGTCGCCAGCTGCAATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTCGGCGGGATTCCTATATTGGATCAAAGACTTTCACCTGCTGATGTTTTTGCTACTGGTGCAGGACATGTTAATCCTGTTAAAGCTAATGATCCTGGTCTTGTTTATGATATTCAACCAGAAGATTACGTTCCTTATCTGTGTGGTTTGGGTTATACTGATCAAGAGATTGAACTTATTGCTCAGTGGGTAGTGAACTGCTCTAATGTGAAAAGTATACCAGAAGCTCAACTGAATTATCCTTCTTTTTCTATTCTGTTGGGATCAGATTCACAGTATTATACAAGAACTTTGACTAATGTTGGATTGGCAAATTCTACCTATAGAGTTGAACTTGAAGTCCCTTTGGCTTTGGGTATGAGTGTTAATCCTAGTGAAATAACATTTAATGAGGTCAATGAGAAGGTTAGTTATTCGGTCGATTTTATACCAAAAACTAAGGAAAGTAGAGGGAACAATACTTATGCTCAGGGTTCTCTCACTTGGGTGTCTGATAAACATGCTGTTAGGATACCAATATCAGTCATTTTCATGTAA 2358 0.3897 MIYLSIYINMHDSRQITSNSFFIFIKSQIMMKTNYTMQLSLLVSLIFILCSFNQITSVFAAEENQEHDHNLMTYIVHVKKSENVASFQSEDLHSWYHSFLPQNFPHKHRMVFSYRHVASGFAVKLTPEEAKSLQEKDGILLARPERTLSLHTTHSPTFLGLKHGQGLWNDDNLGKGVIIGVIDSGIFPSHPSFNDEGMPPPPAKWKGHCEFNGTKICNNKLIGARSLVKSTIQEPPFENIFHGTHTAAEAAGRFIKDASVFGNAKGVAAGMAPNAHLAIYKVCNDKIECPESAILAAMDIAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFAATKNGVFVSCSAGNSGPEYSTLSNEAPWILTVGASTIDRKIVASAKLGNGEEYEGETLFQPKDFPQQLFPLVYAGSLGYGNQTQNQSLCLPGSLKNIDLSGKVVLCDIGEDVSTFVKGQEVLNANGVAVILVNSESDGFSTFATAHVLPAVEVSYAAGLTIKDYINSTYNPTATLLFKGTVIGDSLAPSVVSFSSRGPSQQSPGILKPDIIGPGVNILAAWPVSIDNKTPPFAITSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGIPILDQRLSPADVFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLGYTDQEIELIAQWVVNCSNVKSIPEAQLNYPSFSILLGSDSQYYTRTLTNVGLANSTYRVELEVPLALGMSVNPSEITFNEVNEKVSYSVDFIPKTKESRGNNTYAQGSLTWVSDKHAVRIPISVIFM* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0340 785 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 179 190 IPR023827 -
Mtr5g0340 785 Gene3D - 369 514 - -
Mtr5g0340 785 PRINTS Subtilisin serine protease family (S8) signature 174 193 IPR015500 -
Mtr5g0340 785 PRINTS Subtilisin serine protease family (S8) signature 238 251 IPR015500 -
Mtr5g0340 785 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Mtr5g0340 785 Pfam Fibronectin type-III domain 684 782 IPR041469 -
Mtr5g0340 785 Gene3D Peptidase S8/S53 domain 176 650 IPR036852 GO:0004252|GO:0006508
Mtr5g0340 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 55 784 IPR045051 -
Mtr5g0340 785 Pfam Subtilase family 174 607 IPR000209 GO:0006508|GO:0008236
Mtr5g0340 785 ProSiteProfiles Serine proteases, subtilase domain profile. 147 637 - -
Mtr5g0340 785 Gene3D - 654 784 - -
Mtr5g0340 785 CDD PA_subtilisin_like 377 506 - -
Mtr5g0340 785 CDD Peptidases_S8_3 150 604 IPR034197 -
Mtr5g0340 785 Pfam PA domain 401 491 IPR003137 -
Mtr5g0340 785 SUPERFAMILY Subtilisin-like 150 641 IPR036852 GO:0004252|GO:0006508
Mtr5g0340 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 56 151 IPR037045 -
Mtr5g0340 785 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 55 784 - -
Mtr5g0340 785 Pfam Peptidase inhibitor I9 73 150 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0340 Mtr-Chr5 3192524 3195803 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0340 37 782 Subtilisin-like Serine Gene Family AT5G67360 43.338 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0340 - - gmx:100783595 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0340 5 3192524 3195803 Mtr5g0340 5 3192524 3195803 ECH