Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0334 ATGGCTCATTTGGTTTATGGTGAAACTCCATCTTTTGGAAACTCAACCCATGGACAAGGTCAACAACTTGTTCCATTTCCAACCACTTCAACTTCCTTAAGGATCCTTCTCTTACATGGCAACTTAGAAATTTGCATCCAAGAGGCCAAAAACCTTCCTAACATGGACACTTTTCACAAGAACTTGGGGGCAATGCTTTCAATCCTACCTAAGAAACTTGGTAACAAAATGAACCAAACCAGTGATCCATATGTCACAGTTTCTGTGGCTGGTGCTGTGATTGCTAGAACTTCTGTGATCAGAAATGATGAGAACCCTGTTTGGATGCAACATTTTAATGTACCTGTTGCACATCAAGCATCAGAGATTCACTTTGTTGTAAAAGACAGTGATATTGTTGGTTCACAGCTTATTGGTGCAGTTGGAATTCCAGTTGAAAAGTTATGTGATGGTGCAAAAGTTGAAGGCTTTTTCCCCATTCTTAATACTAATGGAAAACCCTTCAAGACCGAAACCGTTTTGAGCTTATCAATTCAGTATACTCCTATTGATAAGATAACGCTTTATAGCAATGGTGTTGGTTCTGATTATCAAGGCGTTCCTGCTACATATTTTCCACTTAGAAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCCACAAGGTTGTCTTCCTGGTTTGAGGGTTGATGGTGGTGATCATGATGTTATTTATGAGAGTGGAAATTGTTGGCAAGATATCTTTGATGCAATAAGTCAGGCTCGTCGATTGGTCTATATTGTTGGTTGGTCCGTGTACTACAATGTTAGTCTCATTAGGGATACTAGAGATGGAAAAGATTGTACATTAGGTGATCTTCTCAAAGCTAAATCACAAGAAGGTGTGAGAGTGCTTCTACTTGTGTGGGATGATCCTACTTCTAAAAGCATGTTTGGATATAAAACGGTTGGACTTATGAACACTTATGACGAGGAAACTCGCAGTTTTTTCAAGCACTCTTCAGTTAAGGTGCTTCTTTGCCCAAGATCTGGAGGAAAAGGACATAGCTGGCTCAAACAGCAGGAAGCTGGAACAATCTATACTCATCACCAGAAGACAGTCATTGTGGATGCTGATGCTGGTCAGCATAAAAGAAAGATTGTAGCTTTCATCGGAGGCCTTGATTTATGTCTCGGAAGATATGATACTCCAGCGCATTCTCTCTTTAGGACTTTGCAGACAACACACAAAGATGACTTTCATAATCCTAACTACGAGGGTTCTGTTACCGGTTGTCCAAGACAACCATGGCATGATTTGCATTCCAAAGTTGATGGTCCTGCTGCCTATGACATCCTCACCAATTTTGAGGAGCGTTGGTTGATGGCATTAAAAATGACTACACTTCAAAAGATGAAAACTTCACATGATGATTCATTACTGAAAATTGATAGAATCTCTGACATTGTTGGCATTGATGAAGTACCTTTCCATGATGAACATAACAAGGAGAATTGGAATGTTCAGATCTTCCGTTCGATTGATTCCAATTCTGTGAAAGGATTTCCAAAAGAACCGAAAGAGGCTATACAAAGGAACTTGGTTTGTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTCAAGGCAATCAGAGCAGCACAAAAGTTCATTTATATTGAGAATCAATATTTTCTTGGCTCATCATATAATTGGGATTCTTACAAAGACCTCGGTGCAAACAATTTAATTCCAATGGAAATTGCTCTAAAGATAGCAAACAAAATCAAACACAAAGAGAGATTCTGTGTGTATATTGTGATTCCTATGTGGCCTGAAGGTGTACCCTCAAGTACAGCTACTCAGCGGATTCTCTTTTGGCAGTTCAAGACAATGCAAATGATGTATGGAACAATTTACAAGGCATTAGAGGAGGCTGGACTTGAAAATGAGTATGAACCACAGGATTACTTGAATTTCTTTTGCCTTGGCAATCGCGAGCTTTCAGATAATGAAAATATTTCAAATGGTGTAAAATCTAATGGAAAAAACACTCCTCAGGCACTTACTAAAAAGAACAGAAGATTTATGATATATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTAATGGGATCTGCCAACATAAACCAGAGGTCAATGGAAGGCACTAGAGACACAGAAATTGCAATGGCAGCATATCAGCCTAATCATACTTGGGCAACCAAGAAATCCAACCCTCATGGCCAGGTACATGGTTATAGAATGTCACTATGGAGTGAGCACATAGGAGGTGTGGAAGAATGTTTCAAGCAACCAGAGAGCATTGAATGTGTGAGAAGAATAAGGTCATTGAGTGAGTATAACTGGAGACAATATGTGGCTGATGAAGTAACTGAAATGAATGGTCATTTACTGAAATATCCACTTGAGGTTGATTCAAAGGGTATTGTGAAGCCTCTTGTTGGCTGTGAAACATTTCCTTGTTGGTGGAAACATAAAGGGCACCTTTACTGTACTTCAAGAAAATCTCACCATCTAAACATTTTCATCCATTTCATTTTACTTCTCAAACTTTGTCAACAGCTAGTTTACAAGTTACTTAGGATTTTCTTCCATTCAATTGGAGTACTAAGGATTGAACTTATTGCTTTTAAGTATGGCTTTACCCCAATTGCTTTAAATTTTATCCAAGATAGTTTTTTTGTTTTGTTTTGTGTAAGGTACAAACCCTCCGAATTCTTAGGAGAAAGAGTCTATGATAATCTGGAGTTTAGTTAG 2784 0.3833 MAHLVYGETPSFGNSTHGQGQQLVPFPTTSTSLRILLLHGNLEICIQEAKNLPNMDTFHKNLGAMLSILPKKLGNKMNQTSDPYVTVSVAGAVIARTSVIRNDENPVWMQHFNVPVAHQASEIHFVVKDSDIVGSQLIGAVGIPVEKLCDGAKVEGFFPILNTNGKPFKTETVLSLSIQYTPIDKITLYSNGVGSDYQGVPATYFPLRKGGKVTLYQDAHVPQGCLPGLRVDGGDHDVIYESGNCWQDIFDAISQARRLVYIVGWSVYYNVSLIRDTRDGKDCTLGDLLKAKSQEGVRVLLLVWDDPTSKSMFGYKTVGLMNTYDEETRSFFKHSSVKVLLCPRSGGKGHSWLKQQEAGTIYTHHQKTVIVDADAGQHKRKIVAFIGGLDLCLGRYDTPAHSLFRTLQTTHKDDFHNPNYEGSVTGCPRQPWHDLHSKVDGPAAYDILTNFEERWLMALKMTTLQKMKTSHDDSLLKIDRISDIVGIDEVPFHDEHNKENWNVQIFRSIDSNSVKGFPKEPKEAIQRNLVCGKNVMIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYKDLGANNLIPMEIALKIANKIKHKERFCVYIVIPMWPEGVPSSTATQRILFWQFKTMQMMYGTIYKALEEAGLENEYEPQDYLNFFCLGNRELSDNENISNGVKSNGKNTPQALTKKNRRFMIYVHSKGMIVDDEYVLMGSANINQRSMEGTRDTEIAMAAYQPNHTWATKKSNPHGQVHGYRMSLWSEHIGGVEECFKQPESIECVRRIRSLSEYNWRQYVADEVTEMNGHLLKYPLEVDSKGIVKPLVGCETFPCWWKHKGHLYCTSRKSHHLNIFIHFILLLKLCQQLVYKLLRIFFHSIGVLRIELIAFKYGFTPIALNFIQDSFFVLFCVRYKPSEFLGERVYDNLEFS* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0334 927 Gene3D C2 domain 35 176 IPR035892 -
Mtr5g0334 927 PANTHER PHOSPHOLIPASE D 8 829 IPR015679 -
Mtr5g0334 927 CDD C2_plant_PLD 36 181 - -
Mtr5g0334 927 SUPERFAMILY Phospholipase D/nuclease 198 462 - -
Mtr5g0334 927 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 8 829 - -
Mtr5g0334 927 Gene3D Endonuclease Chain A 235 480 - -
Mtr5g0334 927 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 694 721 IPR001736 GO:0003824
Mtr5g0334 927 SMART C2_3c 41 157 IPR000008 -
Mtr5g0334 927 Gene3D Endonuclease Chain A 485 749 - -
Mtr5g0334 927 SUPERFAMILY Phospholipase D/nuclease 540 779 - -
Mtr5g0334 927 Pfam Phospholipase D C terminal 768 829 IPR024632 -
Mtr5g0334 927 PIRSF PLD_plant 27 845 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mtr5g0334 927 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 183 IPR035892 -
Mtr5g0334 927 Pfam PLD-like domain 696 734 IPR025202 -
Mtr5g0334 927 Pfam C2 domain 40 160 IPR000008 -
Mtr5g0334 927 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 360 395 IPR001736 GO:0003824
Mtr5g0334 927 ProSiteProfiles C2 domain profile. 23 158 IPR000008 -
Mtr5g0334 927 Pfam Phospholipase D Active site motif 361 395 IPR001736 GO:0003824
Mtr5g0334 927 SMART pld_4 694 721 IPR001736 GO:0003824
Mtr5g0334 927 SMART pld_4 360 395 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0334 Mtr-Chr5 3132779 3137334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0334 15 829 Phospholipase D Gene Family (Wang group) AT2G42010 67.494 0.0 1202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0334 K01115 - gmx:100786241 1431.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0334 5 3132779 3137334 Mtr5g0334 5 3132779 3137334 ECH