Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0333 ATGGCTCATTTGGTTTATGGTGAAACTCCATCTTTTGGAAACTCACACCATGGACAAGGTCAACAACTTGTTCCATTTCCAACCACTTCAACTTCCTTAAGGATCTTACTCTTACATGGCAACTTAGAAATATGCGTCCAAGAAGCGAAAAACCTTCCTAACATGGACACTTTTCACAAGAAAGTGGGGGAAATGTTTTCAGTCTTACCTAAAAAACTTGGTGGCAAAATTGAAGGCAAAATGTCTCGTAATATAACCAGTGATCCATATGTAACTGTTTCTGTAGCTGGTGCTGTTATTGCAAGAACTTTTGTAATTAGAAACAATGAGAACCCTGTTTGGAATCAGCACTTCAATGTACCTGTTGCACATCTTGCATCAGAAATTCACTTTGTTGTAAAAGACAATGATATTGTTGGTTCACAGGTTATTGGTGCAGTTGGAATTCCAGTAGAAAAATTATGTGATGGTACAAAAGTTGAAGGCTTTTTTCCCATTCTCAATACTAATGGAAAACCCTTTAAGACTGAAGCAATTTTGAGCTTGTCAATTCAGTATACACCTGTTGATAAGGTAGCCCTTTATAGCAATGGTGTTGGTGGTGATTTTCAAGGTGTTCCTGCTACATACTTTCCACTTAGAAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCCACAAGGTTGTCTTCCTAGTTTGAGGGTTGATGGTGGTGATCATGATTTGAGTTATGAGAGTGGAAATTGTTGGCATGATATCTTTGATGCAATAAGTCAGGCGCGACGATTGGTATATATTGTTGGTTGGTCTGTTTACTACAATGTTAGTCTCATTAGGGATACTAGAGATGGAAAAGATTGTACATTAGGTGATCTTCTCAAAGCTAAATCACAAGAAGGTGTGAGAGTGCTTCTACTTGTGTGGGATGATCCTACTTCTAACAGCATGCTTGGATATAAAACAGTTGGACTTATGAACACTTATGATGAGGAAACTCGCAGCTTTTTCAAGCACTCTTCAGTTAGGGTGCTTCTTTGCCCAAGATCTGGAGGAAAAGGACATAGCTTGCTGAAACAACAGGAAGCTGGAACAATCTATACCCATCATCAGAAGACAGTCATTGTGGATGCCGATGCTGGTCAGCATAAAAGAAAGATTGTAGCTTTCATTGGAGGCCTTGATTTATGTCTCGGAAGATATGATACTCCAGCACATTCTCTCTTTAGGACTTTGCAGACAACACACAAAGATGACTTTCATAATCCTAACTTTGTGGGTTCTGTTACTGGTTGTCCAAGACAACCATGGCATGATTTGCATTCCAAAGTTGATGGTCCTGCTGCCTATGACATTCTCACCAATTTTGAGGAGCGTTGGTTAAGAGCACTAAAAATGAATACACTTCAAAAGATGAAAACTTCACATGATGATTCATTACTGAAAATTGACAGAATCTCTGACATTATCGGCATTCATGAAGTACCTTGCCTTGATGGGCATAACAAGGAGACTTGGCATGTTCAGATCTTCCGTTCAATTGATTCCAATTCTGTGAAAGGATTTCCAAAACAACCTAAAGATGCAATACAAAGGAACTTGGTTTGTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTCAAAGCAATCAGAGCAGCACAGAAGTTCATTTATATTGAGAATCAATATTTTCTTGGCTCGTCATATAACTGGGATTCTTTCAAAGACCTCGGTGCAAACAACTTAATTCCGATTGAAATTGCACTAAAAATAGCCAACAAAATCAAACAGAAAGAAAGATTCTCTGTGTATATTGTGATTCCTATGTGGCCTGAAGGTGTACCCTCAAGTACAGCTACTCAGCGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGGAACAATTTACAAGGCATTAGAGGAGGCTGGACTTGCAAATGAGTATGAACCACAAGACTACTTGAATTTCTTTTGCCTTGGCAATCGCGAGCTCGCCGAAGATGAAAACATTTCAAATGTTGTAAAACCTACAGGACAAAACAATCCTCAGGTACTCACTCAAAAGAACAGAAGATTCATGATATATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTAATGGGATCTGCCAACATAAACCAGAGGTCAATGGAAGGCACTAGAGACACAGAAATTGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAACCAAGAAATCCAACCCTCATGGCCAGGTGCATGGCTATAGAATGTCATTGTGGAGTGAGCACATAGGAGGTGTGGAAGAATGTTTCAAGCAACCAGAGAGCATTGAATGTGTGAGAAGAATAAGGTCATTGAGTGAGTATAACTGGAGACAATATGTGGCTGATGAAGTAACTGAAATGAATGGTCATTTACTGAAATATCCACTTGAGGTTGATTCAAAGGGTATTGTGAAGCCTCTTGTTGGCTGTGAAACATTTCCTGATGTTGGTGGAAACATAAAGGGCACCTTTACTGTACTTCAAGAAAATCTCACCATCTAA 2565 0.3891 MAHLVYGETPSFGNSHHGQGQQLVPFPTTSTSLRILLLHGNLEICVQEAKNLPNMDTFHKKVGEMFSVLPKKLGGKIEGKMSRNITSDPYVTVSVAGAVIARTFVIRNNENPVWNQHFNVPVAHLASEIHFVVKDNDIVGSQVIGAVGIPVEKLCDGTKVEGFFPILNTNGKPFKTEAILSLSIQYTPVDKVALYSNGVGGDFQGVPATYFPLRKGGKVTLYQDAHVPQGCLPSLRVDGGDHDLSYESGNCWHDIFDAISQARRLVYIVGWSVYYNVSLIRDTRDGKDCTLGDLLKAKSQEGVRVLLLVWDDPTSNSMLGYKTVGLMNTYDEETRSFFKHSSVRVLLCPRSGGKGHSLLKQQEAGTIYTHHQKTVIVDADAGQHKRKIVAFIGGLDLCLGRYDTPAHSLFRTLQTTHKDDFHNPNFVGSVTGCPRQPWHDLHSKVDGPAAYDILTNFEERWLRALKMNTLQKMKTSHDDSLLKIDRISDIIGIHEVPCLDGHNKETWHVQIFRSIDSNSVKGFPKQPKDAIQRNLVCGKNVMIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSFKDLGANNLIPIEIALKIANKIKQKERFSVYIVIPMWPEGVPSSTATQRILFWQFKTMQMMYGTIYKALEEAGLANEYEPQDYLNFFCLGNRELAEDENISNVVKPTGQNNPQVLTQKNRRFMIYVHSKGMIVDDEYVLMGSANINQRSMEGTRDTEIAMGAYQPNHTWATKKSNPHGQVHGYRMSLWSEHIGGVEECFKQPESIECVRRIRSLSEYNWRQYVADEVTEMNGHLLKYPLEVDSKGIVKPLVGCETFPDVGGNIKGTFTVLQENLTI* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0333 854 ProSiteProfiles C2 domain profile. 23 164 IPR000008 -
Mtr5g0333 854 SUPERFAMILY Phospholipase D/nuclease 535 785 - -
Mtr5g0333 854 Pfam Phospholipase D Active site motif 701 727 IPR001736 GO:0003824
Mtr5g0333 854 Pfam Phospholipase D Active site motif 367 401 IPR001736 GO:0003824
Mtr5g0333 854 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 366 401 IPR001736 GO:0003824
Mtr5g0333 854 PANTHER PHOSPHOLIPASE D 8 854 IPR015679 -
Mtr5g0333 854 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 8 854 - -
Mtr5g0333 854 SMART C2_3c 41 163 IPR000008 -
Mtr5g0333 854 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 700 727 IPR001736 GO:0003824
Mtr5g0333 854 Gene3D C2 domain 35 179 IPR035892 -
Mtr5g0333 854 Gene3D Endonuclease Chain A 239 485 - -
Mtr5g0333 854 CDD C2_plant_PLD 36 187 - -
Mtr5g0333 854 Pfam Phospholipase D C terminal 774 844 IPR024632 -
Mtr5g0333 854 Gene3D Endonuclease Chain A 509 753 - -
Mtr5g0333 854 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Mtr5g0333 854 SUPERFAMILY Phospholipase D/nuclease 203 466 - -
Mtr5g0333 854 SMART pld_4 366 401 IPR001736 GO:0003824
Mtr5g0333 854 SMART pld_4 700 727 IPR001736 GO:0003824
Mtr5g0333 854 PIRSF PLD_plant 27 854 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mtr5g0333 854 Pfam C2 domain 40 166 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0333 Mtr-Chr5 3126447 3131629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0333 32 854 Phospholipase D Gene Family (Wang group) AT2G42010 68.038 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0333 K01115 - gmx:100786241 1496.1