Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0317 ATGGGCGGCGAGGTGAGAGAAAATAGTGCGTACGAAGTTCTGGCGGATCGGTGCCGGAGGTTGGAAGAGCAACAAACCAAGCTGAGGGAGGAGTTCAAGGAGGTGTTGCAGGAGAAGAAGAAGAAGAAGAAACCCAAGGTCAAAGACAACGAAAATGAAGATTCAACTGCGGGTTATCTTTCTGGTTTCTTCTTCTCTCTAAGTCCTTATGCTAACGTTTTGAAATGCATGGGACATGCTGTTTATGTCCACGACGTGACCACCGGCCAGATCATATATTGGAATAATTCAGCAGAAACTCTGTATGGATGGAAGGCAAATGAAATAATTGGACAAAGATTAGCTGATTACCTAGTTTCTGAAGAATATTATGGATCTCTACGAAGAATTCTACATCAGTTGATCACAGGAGTGCCATGGTCTGGACAGTTTCCTTTGAAGAAGAGGTCTGGTGAAATATTTATGGCAATGGTAACAAAAACTCCTCTTTATGAGGACGGTAAGCTTGTTGGTGTTATCTCTATTTCTAGTGATGCGGTTTTAGTTAACTCTAAGGATTTCGACAAGCAAAGAACTTGCCAATCTCGTACGAATGACCAGCCTGGAATTCAAAGTTCAAAAAGGATTCATTGGCCTCCACGCCCACAAATGGCATCATCTGTTTCCAATCTGGCATCAAAGTTTCTTCCACTCCGGCAGAAAGATGACACAATTTCCAAGAACACTTCAGCAGACGCAGATGATCAAACACCAGGGAAACATAGCGTTTATGAAACTGAATCTTGTTCCAGAAGTTACCAAAAAGAAAACACCACTGTCCTGGAGGCCAGCAAGAAGGATGAGTCTACAACTGAATTTGGCCAGCCTTCTAAAATTGCTGCTAGAGTCCTTGCTAAACTCCGAGGGGGAAGTGAAAAATGTAGGAAGTATACTAGAAGTTTTAAAGACAATTGTGCAACTGATGACAGATCAGGAAGTAATAGAGTGAATAATGGAATTGATTTATCTGGAAGTTCAGTTGCATTAATGTCGCACCAGGATATTTCTAATGAAGAAGATAAAGAAGAAAAGCTCCAAAAATATCCAAAGAAATTGGAGCCAAAAGCTACAAATATGGTGATAGAAGATGAAATTGAAGTGCAAAAGCAGCAAGAAGGGTTGCCGTTGGCGAACTCGAAGGAGAGTATAAATGGCTGCATGAGTTCATCAAGCAAATGGAAAAGTGAATCAAACTCTGTTGTAGGGCGTGAAATCCATTGGGAAGACCTTCAATTAAGAAGGGAGATTGGGCAAGGTTCTTATGCTGTTGTTTATCATGGAATTTGGAATGCATCGGATGTTGCTGTCAAGGTTTACTTTGGGAATGGATACGCAGAGGAGACTTTACGAAACCACAAAAAAGAGGTTGATATAATGAAAAGATTGAGACACCCAAATGTATTGCTTTTCATGGGAGCCATATATTCTCAGGAAAGGCATGCCATAGTGACAGAGTTATTACCTAGGGGAAGCCTTTTCAGAACACTTCACAAGAACAATCAAACATTAGACATCAAAAGGCATCTTAGAATGGCTCTTGATGTTGCTAGAGGAATGAATTATCTTCATCACAGAAATCCACCAATTGTGCATAGAGACCTAAAGTCTTCTAACTTGCTTGTTGATAAAAACTGGAATGTCAAGGTTGGAGACTTTGGCCTGTCCAAGTTGAAGGATGCAACTTTACTGACTACCAAATCCGGGAGAGGCACCCCTCAGTGGATGGCCCCTGAAGTCCTCCGCAGTGAACCTTCAAATGAAAAGTCTGATGTCTTCAGCTATGGTGTCGTCCTTTGGGAAATAATGACTCAATCTATTCCATGGAAAGATTTGAATTCCTTACAGGTTGTTGGAATAGTAGGCTTTATGGATAGAAGACTGGACCTGCCAGAGGGGCTTGACCCCCATGTAGCGTCAATCATAAATGACTGCTGGCAAAGTGATCCGGAACAACGGCCATCATTTGAAGAGCTAGTACAGAGAATGATGTTGATTGTCAGCAGAGTAACAGCTTTGTCATTAAACAGCATTGCAGAATCCTGA 2082 0.4164 MGGEVRENSAYEVLADRCRRLEEQQTKLREEFKEVLQEKKKKKKPKVKDNENEDSTAGYLSGFFFSLSPYANVLKCMGHAVYVHDVTTGQIIYWNNSAETLYGWKANEIIGQRLADYLVSEEYYGSLRRILHQLITGVPWSGQFPLKKRSGEIFMAMVTKTPLYEDGKLVGVISISSDAVLVNSKDFDKQRTCQSRTNDQPGIQSSKRIHWPPRPQMASSVSNLASKFLPLRQKDDTISKNTSADADDQTPGKHSVYETESCSRSYQKENTTVLEASKKDESTTEFGQPSKIAARVLAKLRGGSEKCRKYTRSFKDNCATDDRSGSNRVNNGIDLSGSSVALMSHQDISNEEDKEEKLQKYPKKLEPKATNMVIEDEIEVQKQQEGLPLANSKESINGCMSSSSKWKSESNSVVGREIHWEDLQLRREIGQGSYAVVYHGIWNASDVAVKVYFGNGYAEETLRNHKKEVDIMKRLRHPNVLLFMGAIYSQERHAIVTELLPRGSLFRTLHKNNQTLDIKRHLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWNVKVGDFGLSKLKDATLLTTKSGRGTPQWMAPEVLRSEPSNEKSDVFSYGVVLWEIMTQSIPWKDLNSLQVVGIVGFMDRRLDLPEGLDPHVASIINDCWQSDPEQRPSFEELVQRMMLIVSRVTALSLNSIAES* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0317 693 TIGRFAM sensory_box: PAS domain S-box protein 80 178 IPR000014 -
Mtr5g0317 693 Coils Coil 11 41 - -
Mtr5g0317 693 MobiDBLite consensus disorder prediction 235 268 - -
Mtr5g0317 693 Gene3D Transferase(Phosphotransferase) domain 1 502 685 - -
Mtr5g0317 693 ProSitePatterns Protein kinases ATP-binding region signature. 429 450 IPR017441 GO:0005524
Mtr5g0317 693 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 14 686 - -
Mtr5g0317 693 SMART pas_2 68 136 IPR000014 -
Mtr5g0317 693 Pfam Protein tyrosine and serine/threonine kinase 423 674 IPR001245 GO:0004672|GO:0006468
Mtr5g0317 693 CDD STKc_MAP3K-like 429 675 - -
Mtr5g0317 693 SUPERFAMILY PYP-like sensor domain (PAS domain) 70 178 IPR035965 -
Mtr5g0317 693 PANTHER SERINE-THREONINE PROTEIN KINASE 14 686 - -
Mtr5g0317 693 MobiDBLite consensus disorder prediction 243 268 - -
Mtr5g0317 693 ProSiteProfiles PAS repeat profile. 66 138 IPR000014 -
Mtr5g0317 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Mtr5g0317 693 Gene3D PAS domain 78 181 - -
Mtr5g0317 693 SMART serkin_6 423 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0317 693 SUPERFAMILY Protein kinase-like (PK-like) 415 681 IPR011009 -
Mtr5g0317 693 PRINTS Tyrosine kinase catalytic domain signature 497 510 IPR001245 GO:0004672|GO:0006468
Mtr5g0317 693 PRINTS Tyrosine kinase catalytic domain signature 536 554 IPR001245 GO:0004672|GO:0006468
Mtr5g0317 693 PRINTS Tyrosine kinase catalytic domain signature 583 593 IPR001245 GO:0004672|GO:0006468
Mtr5g0317 693 PRINTS Tyrosine kinase catalytic domain signature 602 624 IPR001245 GO:0004672|GO:0006468
Mtr5g0317 693 PRINTS Tyrosine kinase catalytic domain signature 646 668 IPR001245 GO:0004672|GO:0006468
Mtr5g0317 693 Pfam PAS domain 83 178 IPR000014 -
Mtr5g0317 693 CDD PAS 80 178 IPR000014 -
Mtr5g0317 693 MobiDBLite consensus disorder prediction 190 218 - -
Mtr5g0317 693 ProSiteProfiles Protein kinase domain profile. 423 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0317 693 Gene3D Phosphorylase Kinase; domain 1 416 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0317 Mtr-Chr5 2943060 2949912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0317 1 676 MAP Kinase Kinase Kinase AT4G23050 45.765 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mtr5g0317 PK_Tyr_Ser-Thr 3.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0317 - - mtr:MTR_5g010730 1355.5